Evidence map›Paper›PMID 39003239›Full record

ArticleFEMS microbiology ecology2024

Dissolved organic phosphorus bond-class utilization by Synechococcus.

Emily M Waggoner, Kahina Djaoudi, Julia M Diaz, Solange Duhamel

Abstract read
In one paragraph

Article in FEMS microbiology ecology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Emily M WaggonerDepartment of Molecular and Cellular Biology, University of Arizona, 1007 East Lowell Street, Tucson, Arizona, AZ 85721, United States.ORCID 0000-0002-0731-3152
Kahina DjaoudiDepartment of Molecular and Cellular Biology, University of Arizona, 1007 East Lowell Street, Tucson, Arizona, AZ 85721, United States.ORCID 0000-0002-7819-7304
Julia M DiazGeosciences Research Division, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA 92093, United States.ORCID 0000-0003-0732-5564
Solange DuhamelDepartment of Molecular and Cellular Biology, University of Arizona, 1007 East Lowell Street, Tucson, Arizona, AZ 85721, United States.ORCID 0000-0002-8435-4695

Funding

Graduate Training in Biochemistry and Molecular BiologyT32GM136536 · NIGMS · UNIVERSITY OF ARIZONA · PI Andrew Paul Capaldi, FRANS E TAX · 2020 to 2026
$2.4M
National Science Foundation OCE-1737083NIGMS NIH HHS T32 GM136536NIH HHS T32 GM136536Simons Foundation 678537
6 · The paper itself

Abstract

Dissolved organic phosphorus (DOP) contains compounds with phosphoester, phosphoanhydride, and phosphorus-carbon bonds. While DOP holds significant nutritional value for marine microorganisms, the bioavailability of each bond-class to the widespread cyanobacterium Synechococcus remains largely unknown. This study evaluates bond-class specific DOP utilization by Synechococcus strains from open and coastal oceans. Both strains exhibited comparable growth rates when provided phosphate, a phosphoanhydride [3-polyphosphate and 45-polyphosphate], or a DOP compound with both phosphoanhydride and phosphoester bonds (adenosine 5'-triphosphate). Growth rates on phosphoesters [glucose-6-phosphate, adenosine 5'-monophosphate, bis(4-methylumbelliferyl) phosphate] were variable, and neither strain grew on selected phosphorus-carbon compounds. Both strains hydrolyzed 3-polyphosphate, then adenosine 5'-triphosphate, and lastly adenosine 5'-monophosphate, exhibiting preferential enzymatic hydrolysis of phosphoanhydride bonds. The strains' exoproteomes contained phosphorus hydrolases, which combined with enhanced cell-free hydrolysis of 3-polyphosphate and adenosine 5'-triphosphate under phosphate deficiency, suggests active mineralization of phosphoanhydride bonds by these exoproteins. Synechococcus alkaline phosphatases presented broad substrate specificities, including activity toward the phosphoanhydride 3-polyphosphate, with varying affinities between strains. Collectively, these findings underscore the potentially significant role of compounds with phosphoanhydride bonds in Synechococcus phosphorus nutrition and highlight varied growth and enzymatic responses to molecular diversity within DOP bond-classes, thereby expanding our understanding of microbially mediated DOP cycling in marine ecosystems.

Indexed as

PhosphorusSynechococcusAdenosine TriphosphateHydrolysisPolyphosphatesSeawaterAdenosine TriphosphatePhosphorusPolyphosphatesalkaline phosphatasedissolved organic phosphorusphosphoanhydridephosphoesterphosphonateSynechococcus

Identifiers

PMID39003239
PMCPMC11319936

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.