Evidence map›Paper›PMID 39002679›Full record

ArticleThe Journal of biological chemistry2024

The role of AdhE on ethanol tolerance and production in Clostridium thermocellum.

Angel Pech-Canul, Sarah K Hammer, Samantha J Ziegler, Isaiah D Richardson, Bishal D Sharma, Marybeth I Maloney, Yannick J Bomble, Lee R Lynd, Daniel G Olson

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Visual exoproteomics ofbioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. Endogenous Ethanol Metabolism and Development of MASLD-MASH.International journal of molecular sciences · 2025
    Review
  7. Article
  8. The role of AdhE mutations inJournal of bacteriology · 2025
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Angel Pech-CanulThayer School of Engineering, Dartmouth College, Hanover, New Hampshire, USA; Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Sarah K HammerThayer School of Engineering, Dartmouth College, Hanover, New Hampshire, USA; Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Samantha J ZieglerCenter for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA; Biosciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA.
Isaiah D RichardsonThayer School of Engineering, Dartmouth College, Hanover, New Hampshire, USA; Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Bishal D SharmaThayer School of Engineering, Dartmouth College, Hanover, New Hampshire, USA; Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Marybeth I MaloneyThayer School of Engineering, Dartmouth College, Hanover, New Hampshire, USA; Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Yannick J BombleCenter for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA; Biosciences Center, National Renewable Energy Laboratory, Golden, Colorado, USA.
Lee R LyndThayer School of Engineering, Dartmouth College, Hanover, New Hampshire, USA; Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Daniel G OlsonThayer School of Engineering, Dartmouth College, Hanover, New Hampshire, USA; Center for Bioenergy Innovation, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA. Electronic address: daniel.g.olson@dartmouth.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many anaerobic microorganisms use the bifunctional aldehyde and alcohol dehydrogenase enzyme, AdhE, to produce ethanol. One such organism is Clostridium thermocellum, which is of interest for cellulosic biofuel production. In the course of engineering this organism for improved ethanol tolerance and production, we observed that AdhE was a frequent target of mutations. Here, we characterized those mutations to understand their effects on enzymatic activity, as well ethanol tolerance and product formation in the organism. We found that there is a strong correlation between NADH-linked alcohol dehydrogenase (ADH) activity and ethanol tolerance. Mutations that decrease NADH-linked ADH activity increase ethanol tolerance; correspondingly, mutations that increase NADH-linked ADH activity decrease ethanol tolerance. We also found that the magnitude of ADH activity did not play a significant role in determining ethanol titer. Increasing ADH activity had no effect on ethanol titer. Reducing ADH activity had indeterminate effects on ethanol titer, sometimes increasing and sometimes decreasing it. Finally, this study shows that the cofactor specificity of ADH activity was found to be the primary factor affecting ethanol yield. We expect that these results will inform efforts to use AdhE enzymes in metabolic engineering approaches.

Indexed as

Acetivibrio thermocellusAlcohol DehydrogenaseEthanolBacterial ProteinsMetabolic EngineeringMutationAlcohol DehydrogenaseBacterial ProteinsEthanolacetaldehyde dehydrogenaseAcetivibrio thermocellusalcohol dehydrogenasecellulosic biofuelsethanol productionethanol toleranceHungateiclostridiumRuminiclostridium

Identifiers

PMID39002679
PMCPMC11365378

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.