Evidence map›Paper›PMID 39001526›Full record

ArticleCancers2024

Identification of miRNAs Present in Cell- and Plasma-Derived Extracellular Vesicles-Possible Biomarkers of Colorectal Cancer.

Marzena Lenart, Izabela Siemińska, Rafał Szatanek, Anna Mordel, Antoni Szczepanik, Mateusz Rubinkiewicz, Maciej Siedlar, Monika Baj-Krzyworzeka

Abstract read
In one paragraph

Article in Cancers, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Marzena LenartDepartment of Clinical Immunology, Medical College, Jagiellonian University, 30-663 Krakow, Poland.ORCID 0000-0001-6176-2891
Izabela SiemińskaDepartment of Clinical Immunology, Medical College, Jagiellonian University, 30-663 Krakow, Poland.
Rafał SzatanekDepartment of Clinical Immunology, Medical College, Jagiellonian University, 30-663 Krakow, Poland.ORCID 0000-0003-1327-6092
Anna MordelDepartment of Clinical Immunology, University Children's Hospital of Cracow, 30-663 Krakow, Poland.
Antoni SzczepanikThird Department of Surgery, Faculty of Medicine, Jagiellonian University Medical College, 31-202 Krakow, Poland.ORCID 0000-0002-0244-7629
Mateusz RubinkiewiczSecond Department of Surgery, Jagiellonian University Medical College, 30-688 Krakow, Poland.ORCID 0000-0001-7087-6639
Maciej SiedlarDepartment of Clinical Immunology, Medical College, Jagiellonian University, 30-663 Krakow, Poland.ORCID 0000-0002-3904-5412
Monika Baj-KrzyworzekaDepartment of Clinical Immunology, Medical College, Jagiellonian University, 30-663 Krakow, Poland.

Funding

National Science Center 2019/33/B/NZ5/0064 (MBK) and 2021/41/N/NZ6/02770 (IS), N41/DBS/000605 (IS)
6 · The paper itself

Abstract

Globally, an increasing prevalence of colorectal cancer (CRC) prompts a need for the development of new methods for early tumor detection. MicroRNAs (also referred to as miRNAs) are short non-coding RNA molecules that play a pivotal role in the regulation of gene expression. MiRNAs are effectively transferred to extracellular vesicle (EVs) membrane sacs commonly released by cells. Our study aimed to examine the expression of miRNAs in four CRC cell lines and EVs derived from them (tumor EVs) in comparison to the normal colon epithelium cell line and its EVs. EVs were isolated by ultracentrifugation from the culture supernatant of SW480, SW620, SW1116, HCT116 and normal CCD841CoN cell lines and characterized according to the MISEV2023 guidelines. MiRNAs were analyzed by small RNA sequencing and validated by quantitative PCR. The performed analysis revealed 22 common miRNAs highly expressed in CRC cell lines and effectively transferred to tumor EVs, including miR-9-5p, miR-182-5p, miR-196b-5p, miR-200b-5p, miR-200c-3p, miR-425-5p and miR-429, which are associated with development, proliferation, invasion and migration of colorectal cancer cells, as well as in vesicle maturation and transport-associated pathways. In parallel, normal cells expressed miRNAs, such as miR-369 and miR-143, which play a role in proinflammatory response and tumor suppression. The analysis of selected miRNAs in plasma-derived EVs and tumor samples from CRC patients showed the similarity of miRNA expression profile between the patients' samples and CRC cell lines. Moreover, miR-182-5p, miR-196-5p, miR-425-5p and miR-429 were detected in several EV samples isolated from patients' plasma. Our results suggest that miR-182-5p, miR-196b-5p and miR-429 are differentially expressed between EVs from CRC patients and healthy donors, which might have clinical implications.

Indexed as

colorectal cancercolorectal cancer cell linesmiRNA expression profilemiRNAstumor-derived extracellular vesicles

Identifiers

PMID39001526
PMCPMC11240749

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.