Evidence map›Paper›PMID 39000174›Full record

ReviewInternational journal of molecular sciences2024

Bridging the Gap: From Photoperception to the Transcription Control of Genes Related to the Production of Phenolic Compounds.

Adriana Volná, Jiří Červeň, Jakub Nezval, Radomír Pech, Vladimír Špunda

Abstract readReview
In one paragraph

Review in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Abiotic Stresses in Plants: From Molecules to Environment.International journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Adriana VolnáDepartment of Physics, University of Ostrava, 710 00 Ostrava, Czech Republic.
Jiří ČerveňDepartment of Biology and Ecology, University of Ostrava, 710 00 Ostrava, Czech Republic.
Jakub NezvalDepartment of Physics, University of Ostrava, 710 00 Ostrava, Czech Republic.ORCID 0000-0002-1465-6604
Radomír PechDepartment of Physics, University of Ostrava, 710 00 Ostrava, Czech Republic.ORCID 0009-0003-8328-1804
Vladimír ŠpundaDepartment of Physics, University of Ostrava, 710 00 Ostrava, Czech Republic.ORCID 0000-0002-4467-1442

Funding

Czech Science Foundation GACR 21-18532SEuropean Union CZ.10.03.01./00/22_003/0000003Ministry of Education, Youth and Sports CZ.02.01.01/00/22_008/0004635Moravian-Silesian Region RRC/10/2021University of Ostrava SGS/PřF/2024
6 · The paper itself

Abstract

Phenolic compounds are a group of secondary metabolites responsible for several processes in plants-these compounds are involved in plant-environment interactions (attraction of pollinators, repelling of herbivores, or chemotaxis of microbiota in soil), but also have antioxidative properties and are capable of binding heavy metals or screening ultraviolet radiation. Therefore, the accumulation of these compounds has to be precisely driven, which is ensured on several levels, but the most important aspect seems to be the control of the gene expression. Such transcriptional control requires the presence and activity of transcription factors (TFs) that are driven based on the current requirements of the plant. Two environmental factors mainly affect the accumulation of phenolic compounds-light and temperature. Because it is known that light perception occurs via the specialized sensors (photoreceptors) we decided to combine the biophysical knowledge about light perception in plants with the molecular biology-based knowledge about the transcription control of specific genes to bridge the gap between them. Our review offers insights into the regulation of genes related to phenolic compound production, strengthens understanding of plant responses to environmental cues, and opens avenues for manipulation of the total content and profile of phenolic compounds with potential applications in horticulture and food production.

Indexed as

Gene Expression Regulation, PlantLightPhenolsPlantsTranscription FactorsTranscription, GeneticPhenolsTranscription Factorsphotoreceptorsradiationtemperaturetranscription factors

Identifiers

PMID39000174
PMCPMC11241081

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.