Evidence map›Paper›PMID 38999994›Full record

ArticleInternational journal of molecular sciences2024

Identifying Core Genes Related to Low-Temperature Stress Resistance in Quinoa Seedlings Based on WGCNA.

Lingyuan Zhang, Guofei Jiang, Xuqin Wang, Yutao Bai, Ping Zhang, Junna Liu, Li Li, Liubin Huang, Peng Qin

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Lingyuan ZhangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.
Guofei JiangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.
Xuqin WangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.
Yutao BaiCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.
Ping ZhangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.
Junna LiuCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.
Li LiCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.
Liubin HuangCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.
Peng QinCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming 650201, China.

Funding

Yunnan Expert Workstation 202205AF150001
6 · The paper itself

Abstract

Quinoa is a nutritious crop that is tolerant to extreme environmental conditions; however, low-temperature stress can affect quinoa growth, development, and quality. Considering the lack of molecular research on quinoa seedlings under low-temperature stress, we utilized a Weighted Gene Co-Expression Network Analysis to construct weighted gene co-expression networks associated with physiological indices and metabolites related to low-temperature stress resistance based on transcriptomic data. We screened 11 co-expression modules closely related to low-temperature stress resistance and selected 12 core genes from the two modules that showed the highest associations with the target traits. Following the functional annotation of these genes to determine the key biological processes and metabolic pathways involved in low-temperature stress, we identified four important transcription factors involved in resistance to low-temperature stress:

Indexed as

Chenopodium quinoaGene Expression Regulation, PlantGene Regulatory NetworksSeedlingsCold-Shock ResponseCold TemperatureGene Expression ProfilingGenes, PlantPlant ProteinsStress, PhysiologicalTranscriptomePlant Proteinsgene interactions networkslow-temperature stressquinoaTFsWeighted Gene Co-Expression Network Analysis

Identifiers

PMID38999994
PMCPMC11241592

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.