Evidence map›Paper›PMID 38999950›Full record

ArticleInternational journal of molecular sciences2024

Comparative Transcriptome Analysis Reveals Key Functions of MiMYB Gene Family in Macadamia Nut Pericarp Formation.

Qiujin Tan, Xiuju Huan, Zhenzhen Pan, Xiaozhou Yang, Yuanrong Wei, Chunheng Zhou, Wenlin Wang, Lifeng Wang

Abstract readComparative Study
PubMed Full text at PMC Publisher
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Qiujin TanGuangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China.
Xiuju HuanGuangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China.
Zhenzhen PanGuangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China.
Xiaozhou YangGuangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China.
Yuanrong WeiGuangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China.
Chunheng ZhouGuangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China.
Wenlin WangGuangxi South Subtropical Agricultural Research Institute, Longzhou 532415, China.
Lifeng WangRubber Research Institute, Chinese Academy of Tropical Agricultural Sciences, Haikou 571101, China.ORCID 0000-0003-2803-3464

Funding

Chongzuo Science and Technology Plan Project Chongke2022QN1220Science and Technology Development Fund Project of Guangxi Academy of Agricultural Sciences 2023YM42Science and Technology Development Fund Project of Guangxi Academy of Agricultural Sciences Guinongke2021YT156
6 · The paper itself

Abstract

Macadamia nuts are one of the most important economic food items in the world. Pericarp thickness and flavonoid composition are the key quality traits of Macadamia nuts, but the underlying mechanism of pericarp formation is still unknown. In this study, three varieties with significantly different pericarp thicknesses, namely, A38, Guire No.1, and HAES 900, at the same stage of maturity, were used for transcriptome analysis, and the results showed that there were significant differences in their gene expression profile. A total of 3837 new genes were discovered, of which 1532 were functionally annotated. The GO, COG, and KEGG analysis showed that the main categories in which there were significant differences were flavonoid biosynthesis, phenylpropanoid biosynthesis, and the cutin, suberine, and wax biosynthesis pathways. Furthermore, 63 MiMYB transcription factors were identified, and 56 R2R3-MYB transcription factors were clustered into different subgroups compared with those in Arabidopsis R2R3-MYB. Among them, the S4, S6, and S7 subgroups were involved in flavonoid biosynthesis and pericarp formation. A total of 14

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantMacadamiaNutsPlant ProteinsTranscription FactorsTranscriptomeArabidopsisFlavonoidsMultigene FamilyPhylogenyFlavonoidsPlant ProteinsTranscription Factorsflavonoidmacadamia nutMiMYBpericarptranscriptome

Identifiers

PMID38999950
PMCPMC11241416

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.