Evidence map›Paper›PMID 38996032›Full record

ArticleScience advances2024

Comparative single-cell transcriptional and proteomic atlas of clinical-grade injectable mesenchymal source tissues.

Severin Ruoss, Chanond A Nasamran, Scott T Ball, Jeffrey L Chen, Kenneth N Halter, Kelly A Bruno, Thomas C Whisenant, Jesal N Parekh, Shanelle N Dorn, Mary C Esparza and 4 more

Abstract readComparative Study
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Severin RuossDepartment of Orthopaedic Surgery, UC San Diego, La Jolla, CA, USA.ORCID 0000-0001-8896-635X
Chanond A NasamranCenter for Computational Biology and Bioinformatics, UC San Diego, La Jolla, CA, USA.
Scott T BallDepartment of Orthopaedic Surgery, UC San Diego, La Jolla, CA, USA.ORCID 0000-0002-1879-7703
Jeffrey L ChenDepartment of Anesthesiology, Center for Pain, UC San Diego, La Jolla, CA, USA.
Kenneth N HalterDepartment of Anesthesiology, Center for Pain, UC San Diego, La Jolla, CA, USA.ORCID 0009-0001-9174-910X
Kelly A BrunoDepartment of Anesthesiology, Center for Pain, UC San Diego, La Jolla, CA, USA.
Thomas C WhisenantCenter for Computational Biology and Bioinformatics, UC San Diego, La Jolla, CA, USA.ORCID 0000-0002-2838-1605
Jesal N ParekhDepartment of Orthopaedic Surgery, UC San Diego, La Jolla, CA, USA.
Shanelle N DornDepartment of Orthopaedic Surgery, UC San Diego, La Jolla, CA, USA.
Mary C EsparzaDepartment of Orthopaedic Surgery, UC San Diego, La Jolla, CA, USA.
Shannon N BremnerDepartment of Orthopaedic Surgery, UC San Diego, La Jolla, CA, USA.ORCID 0000-0002-9730-6510
Kathleen M FischCenter for Computational Biology and Bioinformatics, UC San Diego, La Jolla, CA, USA.ORCID 0000-0002-0117-7444
Adam J EnglerChien-Lay Department of Bioengineering, UC San Diego, La Jolla, CA, USA.ORCID 0000-0003-1642-5380
Samuel R WardDepartment of Orthopaedic Surgery, UC San Diego, La Jolla, CA, USA.ORCID 0000-0002-4470-155X

Funding

UC San Diego Clinical and Translational Research InstituteUL1TR001442 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIRESTEIN, GARY S, HOGARTH, MICHAEL · 2015 to 2024
$88.3M
Acquisition of an Orbitrap Elite with ETDS10OD021724 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 2016 to 2016
$600k
Synapt G2-S System with HXMS AutomationS10OD016234 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 2013 to 2013
$600k
NCATS NIH HHS UL1 TR001442NIH HHS S10 OD016234NIH HHS S10 OD021724
6 · The paper itself

Abstract

Bone marrow aspirate concentrate (BMAC) and adipose-derived stromal vascular fraction (ADSVF) are the most marketed stem cell therapies to treat a variety of conditions in the general population and elite athletes. Both tissues have been used interchangeably clinically even though their detailed composition, heterogeneity, and mechanisms of action have neither been rigorously inventoried nor compared. This lack of information has prevented investigations into ideal dosages and has facilitated anecdata and misinformation. Here, we analyzed single-cell transcriptomes, proteomes, and flow cytometry profiles from paired clinical-grade BMAC and ADSVF. This comparative transcriptional atlas challenges the prevalent notion that there is one therapeutic cell type present in both tissues. We also provide data of surface markers that may enable isolation and investigation of cell (sub)populations. Furthermore, the proteome atlas highlights intertissue and interpatient heterogeneity of injected proteins with potentially regenerative or immunomodulatory capacities. An interactive webtool is available online.

Indexed as

Mesenchymal Stem CellsProteomeProteomicsSingle-Cell AnalysisAdipose TissueBone Marrow CellsGene Expression ProfilingHumansTranscriptomeProteome

Identifiers

PMID38996032
PMCPMC11244553

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.