Evidence map›Paper›PMID 38995818›Full record

ArticleeLife2024

Evolutionary adaptation of an HP1-protein chromodomain integrates chromatin and DNA sequence signals.

Lisa Baumgartner, Jonathan J Ipsaro, Ulrich Hohmann, Dominik Handler, Alexander Schleiffer, Peter Duchek, Julius Brennecke

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lisa BaumgartnerInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Vienna, Austria.ORCID https://orcid.org/0000-0001-7769-1274
Jonathan J IpsaroHoward Hughes Medical Institute, W.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States.ORCID https://orcid.org/0000-0002-2743-3776
Ulrich HohmannInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Vienna, Austria.ORCID https://orcid.org/0000-0003-2124-1439
Dominik HandlerInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Vienna, Austria.ORCID https://orcid.org/0000-0002-1059-4960
Alexander SchleifferInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Vienna, Austria.ORCID https://orcid.org/0000-0001-6251-2747
Peter DuchekInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Vienna, Austria.
Julius BrenneckeInstitute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Vienna, Austria.ORCID https://orcid.org/0000-0002-5141-0814

Funding

Combination CD-Fluorescence Polarization Spectrophotometer for the Columbia Precision Biomolecular Characterization FacilityS10OD025102 · OD · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI HUNT, JOHN FRANCIS · 2018 to 2018
$138k
Austrian Science Fund 10.55776/w1207EMBO long-term fellowship ALTF_1175-2019European Research Council CoG-682181European Research Council ERC-2015-CoG-682181Horizon 2020 Framework Programme 896416NIH HHS 1S10OD025102-01NIH HHS S10 OD025102
6 · The paper itself

Abstract

Members of the diverse heterochromatin protein 1 (HP1) family play crucial roles in heterochromatin formation and maintenance. Despite the similar affinities of their chromodomains for di- and tri-methylated histone H3 lysine 9 (H3K9me2/3), different HP1 proteins exhibit distinct chromatin-binding patterns, likely due to interactions with various specificity factors. Previously, we showed that the chromatin-binding pattern of the HP1 protein Rhino, a crucial factor of the

Indexed as

ChromatinChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneDrosophila melanogasterDrosophila ProteinsAnimalsDNAEvolution, MolecularHistonesPhylogenyProtein BindingRNA, Small InterferingChromatinChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneDNADrosophila ProteinsHistonesRNA, Small InterferingchromodomainchromosomesD. melanogastergene expressiongeneticsgenomicsheterochromatinHP1 proteinspiRNA pathwaytransposon silencingzinc finger protein

Identifiers

PMID38995818
PMCPMC11245307

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.