Evidence map›Paper›PMID 38994234›Full record

ArticleJID innovations : skin science from molecules to population health2024

MicroRNA Signatures Associated with Basal Cell Carcinoma Subtypes.

Suzanne Fastner, Hafeez Rahman, Jose Gutierrez, Nathan Shen, Scott R Florell, Abigail Florell, Chris J Stubben, Kenneth M Boucher, Dekker C Deacon, Robert L Judson-Torres and 1 more

Abstract read
In one paragraph

Article in JID innovations : skin science from molecules to population health, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Contribution of Keratinocytes in Skin Cancer Initiation and Progression.International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Suzanne FastnerHuntsman Cancer Institute, University of Utah Health Sciences Center, Salt Lake City, Utah, USA.
Hafeez RahmanHuntsman Cancer Institute, University of Utah Health Sciences Center, Salt Lake City, Utah, USA.
Jose GutierrezUniversity of Utah School of Medicine, Salt Lake City, Utah, USA.
Nathan ShenHuntsman Cancer Institute, University of Utah Health Sciences Center, Salt Lake City, Utah, USA.
Scott R FlorellDepartment of Dermatology, University of Utah Health Sciences Center, Salt Lake City, Utah, USA.
Abigail FlorellDepartment of Dermatology, University of Utah Health Sciences Center, Salt Lake City, Utah, USA.
Chris J StubbenHuntsman Cancer Institute, University of Utah Health Sciences Center, Salt Lake City, Utah, USA.
Kenneth M BoucherHuntsman Cancer Institute, University of Utah Health Sciences Center, Salt Lake City, Utah, USA.
Dekker C DeaconHuntsman Cancer Institute, University of Utah Health Sciences Center, Salt Lake City, Utah, USA.
Robert L Judson-TorresHuntsman Cancer Institute, University of Utah Health Sciences Center, Salt Lake City, Utah, USA.
Douglas GrossmanHuntsman Cancer Institute, University of Utah Health Sciences Center, Salt Lake City, Utah, USA.

Funding

CTSA UM1 Program at University of UtahUM1TR004409 · NCATS · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI RACHEL HESS, Jennifer Juhl Majersik · 2023 to 2026
$21.9M
NCATS NIH HHS UM1 TR004409
6 · The paper itself

Abstract

Basal cell carcinoma (BCC) is classified histologically into subtypes that determine treatment decisions. MicroRNAs (miRs) are short noncoding RNAs that may serve as diagnostic biomarkers. We investigated if particular miRs could distinguish BCC subtypes. We sequenced miRs from 55 archival BCC and 9 control skin specimens and then validated these miRs by qRT-PCR assay on a second BCC cohort (18 superficial, 16 nodular, 15 infiltrative) and control skin (n = 12). Expression values for individual miRs were normalized to miR-16-5p, which was the least variant among the control skin and BCC samples. We found that (i) miR-383-5p and miR-145-5p are downregulated in all BCC subtypes compared with control skin, (ii) miR-181c-5p is downregulated in superficial compared with invasive (nodular/infiltrative) BCC, and (iii) miR-22-5p and miR-708-5p are upregulated in infiltrative compared with superficial/nodular BCC and miR-30c-5p is downregulated in infiltrative compared with nodular BCC. Receiver operating characteristic analysis demonstrated excellent capacity of these miRs to discriminate between BCC and control skin (area under the curve, 0.94-0.98), whereas the capacity to discriminate between superficial and invasive subtypes was less robust (area under the curve, 0.7-0.8). Future prospective studies may determine the utility of these miRs as diagnostic biomarkers to guide biopsy and treatment of BCC.

Indexed as

BCCmiRNASequencingSignatureSubtype

Identifiers

PMID38994234
PMCPMC11238194

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.