Evidence map›Paper›PMID 38993938›Full record

ArticleFrontiers in plant science2024

Genome-wide identification, characterization, and evolutionary analysis of the barley TALE gene family and its expression profiles in response to exogenous hormones.

Tian-Jiang Liao, Tao Huang, Hui-Yan Xiong, Jie-Cuo Duo, Jian-Zhi Ma, Ming-Yang Du, Rui-Jun Duan

Abstract read
In one paragraph

Article in Frontiers in plant science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Tian-Jiang LiaoCollege of Eco-environmental Engineering, Qinghai University, Xining, Qinghai, China.
Tao HuangCollege of Eco-environmental Engineering, Qinghai University, Xining, Qinghai, China.
Hui-Yan XiongCollege of Agriculture and Animal Husbandry, Qinghai University, Xining, Qinghai, China.
Jie-Cuo DuoCollege of Eco-environmental Engineering, Qinghai University, Xining, Qinghai, China.
Jian-Zhi MaCollege of Eco-environmental Engineering, Qinghai University, Xining, Qinghai, China.
Ming-Yang DuCollege of Eco-environmental Engineering, Qinghai University, Xining, Qinghai, China.
Rui-Jun DuanCollege of Eco-environmental Engineering, Qinghai University, Xining, Qinghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Three-amino-loop-extension (TALE) family belongs to the homeobox gene superfamily and occurs widely in plants, playing a crucial role in regulating their growth and development. Currently, genome-wide analysis of the TALE family has been completed in many plants. However, the systematic identification and hormone response analysis of the TALE gene family in barley are still lacking. In this study, 21 TALE candidate genes were identified in barley, which can be divided into KNOX and BELL subfamilies. Barley TALE members in the same subfamily of the phylogenetic tree have analogically conserved motifs and gene structures, and segmental duplications are largely responsible for the expansion of the HvTALE family. Analysis of TALE orthologous and homologous gene pairs indicated that the HvTALE family has mainly undergone purifying selective pressure. Through spatial structure simulation, HvKNOX5-HvKNOX6 and HvKNOX5-HvBELL11 complexes are all formed through hydrogen bonding sites on both the KNOX2 and homeodomain (HD) domains of HvKNOX5, which may be essential for protein interactions among the HvTALE family members. Expression pattern analyses reveal the potential involvement of most

Indexed as

barleyBELLgene familygrowth and developmenthormones treatmentKNOXTALE

Identifiers

PMID38993938
PMCPMC11236544

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.