Evidence map›Paper›PMID 38990001›Full record

ArticlemSphere2024

Genomic analysis and identification of a novel superantigen, SargEY, in

Fatkhanuddin Aziz, Junzo Hisatsune, Hisaya K Ono, Junko Kajimura, Liansheng Yu, Kanako Masuda, Hiroki Kitagawa, Yusuke Sato'o, Koji Yahara, Mika Yamaoka and 11 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mSphere, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Fatkhanuddin AzizDepartment of Bacteriology, Graduate School of Biomedical and Health Sciences, Hiroshima City, Hiroshima, Japan.ORCID 0000-0003-0831-914X
Junzo HisatsuneDepartment of Bacteriology, Graduate School of Biomedical and Health Sciences, Hiroshima City, Hiroshima, Japan.ORCID 0000-0001-9330-4203
Hisaya K OnoLaboratory of Zoonoses, Kitasato University School of Veterinary Medicine, Towada, Aomori, Japan.
Junko KajimuraDepartment of Molecular Biosciences, Radiation Effects Research Foundation, Hiroshima City, Hiroshima, Japan.
Liansheng YuAntimicrobial Resistance Research Center, National Institute of Infectious Diseases, Higashimurayama, Tokyo, Japan.
Kanako MasudaDepartment of Bacteriology, Graduate School of Biomedical and Health Sciences, Hiroshima City, Hiroshima, Japan.
Hiroki KitagawaDepartment of Infectious Diseases, Hiroshima University Hospital, Hiroshima City, Hiroshima, Japan.
Yusuke Sato'oDivision of Bacteriology, Department of Infection and Immunity, School of Medicine, Jichi Medical University, Shimotsuke-shi, Tochigi, Japan.
Koji YaharaAntimicrobial Resistance Research Center, National Institute of Infectious Diseases, Higashimurayama, Tokyo, Japan.
Mika YamaokaDepartment of Molecular Biosciences, Radiation Effects Research Foundation, Hiroshima City, Hiroshima, Japan.
Akio NakaneDepartment of Microbiology and Immunology, Hirosaki University, Hirosaki, Aomori, Japan.
Hiroshi KawasakiDepartment of Dermatology, Keio University School of Medicine, Shijuku-ku, Tokyo, Japan.
Shoko ObataDepartment of Dermatology, Keio University School of Medicine, Shijuku-ku, Tokyo, Japan.
Ayano Fukushima-NomuraDepartment of Dermatology, Keio University School of Medicine, Shijuku-ku, Tokyo, Japan.
Yoshihiro ItoDepartment of Dermatology, Keio University School of Medicine, Shijuku-ku, Tokyo, Japan.
Meiji Soe AungDepartment of Hygiene, Sapporo Medical University School of Medicine, Sapporo, Hokkaido, Japan.
Masayuki AmagaiDepartment of Dermatology, Keio University School of Medicine, Shijuku-ku, Tokyo, Japan.
Siti Isrina Oktavia SalasiaDepartment of Clinical Pathology, Faculty of Veterinary Medicine, Universitas Gadjah Mada, Yogyakarta, Indonesia.
Hiroki OhgeDepartment of Infectious Diseases, Hiroshima University Hospital, Hiroshima City, Hiroshima, Japan.
Yoichiro KusunokiDepartment of Molecular Biosciences, Radiation Effects Research Foundation, Hiroshima City, Hiroshima, Japan.
Motoyuki SugaiDepartment of Bacteriology, Graduate School of Biomedical and Health Sciences, Hiroshima City, Hiroshima, Japan.ORCID 0000-0001-9252-7739

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During surveillance of IMPORTANCE:

Indexed as

Dermatitis, AtopicEnterotoxinsGenome, BacterialStaphylococcusSuperantigensAnimalsGenomicsHumansPhylogenyStaphylococcal InfectionsWhole Genome SequencingEnterotoxinsSuperantigensargenteusenterotoxinshuman T-cellStaphylococcussuperantigenTCR Vα

Identifiers

PMID38990001
PMCPMC11288046

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.