Evidence map›Paper›PMID 38988990›Full record

ArticleJournal of medical imaging (Bellingham, Wash.)2024

Lung vessel connectivity map as anatomical prior knowledge for deep learning-based lung lobe segmentation.

Simone Bendazzoli, Emelie Bäcklin, Örjan Smedby, Birgitta Janerot-Sjoberg, Bryan Connolly, Chunliang Wang

Abstract read
In one paragraph

Article in Journal of medical imaging (Bellingham, Wash.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Simone BendazzoliKTH Royal Institute of Technology, Department of Biomedical Engineering and Health Systems, Huddinge, Sweden.ORCID https://orcid.org/0000-0001-6673-1314
Emelie BäcklinKTH Royal Institute of Technology, Department of Biomedical Engineering and Health Systems, Huddinge, Sweden.ORCID https://orcid.org/0000-0003-2850-6604
Örjan SmedbyKTH Royal Institute of Technology, Department of Biomedical Engineering and Health Systems, Huddinge, Sweden.ORCID https://orcid.org/0000-0002-7750-1917
Birgitta Janerot-SjobergKarolinska Institutet, Department of Clinical Science, Intervention and Technology, Solna, Sweden.
Bryan ConnollyKarolinska Institutet, Department of Radiology, Solna, Sweden.
Chunliang WangKTH Royal Institute of Technology, Department of Biomedical Engineering and Health Systems, Huddinge, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Our study investigates the potential benefits of incorporating prior anatomical knowledge into a deep learning (DL) method designed for the automated segmentation of lung lobes in chest CT scans. Approach: We introduce an automated DL-based approach that leverages anatomical information from the lung's vascular system to guide and enhance the segmentation process. This involves utilizing a lung vessel connectivity (LVC) map, which encodes relevant lung vessel anatomical data. Our study explores the performance of three different neural network architectures within the nnU-Net framework: a standalone U-Net, a multitasking U-Net, and a cascade U-Net. Results: Experimental findings suggest that the inclusion of LVC information in the DL model can lead to improved segmentation accuracy, particularly, in the challenging boundary regions of expiration chest CT volumes. Furthermore, our study demonstrates the potential for LVC to enhance the model's generalization capabilities. Finally, the method's robustness is evaluated through the segmentation of lung lobes in 10 cases of COVID-19, demonstrating its applicability in the presence of pulmonary diseases. Conclusions: Incorporating prior anatomical information, such as LVC, into the DL model shows promise for enhancing segmentation performance, particularly in the boundary regions. However, the extent of this improvement has limitations, prompting further exploration of its practical applicability.

Indexed as

3D segmentationcomputed tomographydeep learningpulmonary lobe segmentation

Identifiers

PMID38988990
PMCPMC11231955

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.