Evidence map›Paper›PMID 38987684›Full record

ArticleBMC plant biology2024

Genome-wide analysis of the SWEET gene family in Hemerocallis citrina and functional characterization of HcSWEET4a in response to salt stress.

Lihong Cao, Jinyao Wang, Lixuan Wang, Huili Liu, Wenjing Wu, Feifan Hou, Yuting Liu, Yang Gao, Xiaojing Cheng, Sen Li and 1 more

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Overexpression of LotusPlants (Basel, Switzerland) · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Genome-wide identification of the NAC family inFrontiers in plant science · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Lihong CaoCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China.
Jinyao WangCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China.
Lixuan WangCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China.
Huili LiuCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China.
Wenjing WuCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China.
Feifan HouCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China.
Yuting LiuCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China.
Yang GaoCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China.
Xiaojing ChengCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China.
Sen LiCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China. saulisen@163.com.
Guoming XingCollege of Horticulture, Shanxi Agricultural University, Taigu, 030801, Jinzhong, China. xingguoming@163.com.

Funding

Biological breeding engineering program of Shanxi Agricultural University YZGC122Shanxi provincial breeding joint research project YZGG-10Shanxi provincial key research and development project 202102140601009
6 · The paper itself

Abstract

Sugars will be eventually effluxed transporters (SWEETs) have been confirmed to play diverse physiological roles in plant growth, development and stress response. However, the characteristics and functions of the SWEET genes in Hemerocallis citrina remain unclear and poorly elucidated. In this study, the whole genome of Hemerocallis citrina was utilized to conduct bioinformatics analysis and a total of 19 HcSWEET genes were successfully identified. Analysis of the physicochemical properties indicated dominant differences among these HcSWEETs. A phylogenetic analysis revealed that HcSWEET proteins can be divided into 4 clades ranging from Clade I to IV, where proteins within the same clade exhibited shared conserved motifs and gene structures. Five to six exons were contained in the majority of HcSWEET genes, which were unevenly distributed across 11 chromosomes. The gene duplication analysis showed the presence of 4 gene pairs. Comparative syntenic maps revealed that the HcSWEET gene family might present more closed homology in monocotyledons than dicotyledons. Cis-acting element analysis of HcSWEET genes indicated key responsiveness to various hormones, light, and stresses. Additionally, transcriptome sequencing analysis suggested that most HcSWEET genes had a relatively higher expression in roots, and HcSWEET4a was significantly up-regulated under salt stress. Overexpression further verified the possibility that HcSWEET4a was involved in response to salt stress, which provides novel insights and facilitates in-depth studies of the functional analysis of HcSWEETs in resistance to abiotic stress.

Indexed as

Multigene FamilyPhylogenyPlant ProteinsSalt StressGene Expression Regulation, PlantGenes, PlantGenome, PlantPlant ProteinsAbiotic stressFunctional characterizationGenome-wideHemerocallis citrinaSWEETs

Identifiers

PMID38987684
PMCPMC11238388

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.