Evidence map›Paper›PMID 38985658›Full record

ArticleG3 (Bethesda, Md.)2024

Dominant suppressor genes of p53-induced apoptosis in Drosophila melanogaster.

Tamás Szlanka, Tamás Lukacsovich, Éva Bálint, Erika Virágh, Kornélia Szabó, Ildikó Hajdu, Enikő Molnár, Yu-Hsien Lin, Ágnes Zvara, Ildikó Kelemen-Valkony and 14 more

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Tamás SzlankaInstitute of Biochemistry, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Tamás LukacsovichBrain Research Institute, University of Zurich, 8057 Zurich, Switzerland.
Éva BálintInstitute of Biochemistry, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Erika VirághInstitute of Biochemistry, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Kornélia SzabóInstitute of Genetics, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Ildikó HajduInstitute of Genetics, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Enikő MolnárInstitute of Genetics, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Yu-Hsien LinBiology Centre, Czech Academy of Sciences, 37005 České Budějovice, Czech Republic.ORCID 0000-0002-2647-0495
Ágnes ZvaraLaboratory of Functional Genomics, Core Facility, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Ildikó Kelemen-ValkonyCellular Imaging Laboratory, Core Facility, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Orsolya MéhiInstitute of Genetics, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
István TörökDepartment of Developmental Genetics, German Cancer Research Centre, 69120 Heidelberg, Germany.
Zoltán HegedűsBioinformatics Laboratory, Core Facility, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Brigitta KissInstitute of Genetics, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Beáta RamaszInstitute of Genetics, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Laura M MagdalenaInstitute of Genetics, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
László PuskásLaboratory of Functional Genomics, Core Facility, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Bernard M MechlerDepartment of Developmental Genetics, German Cancer Research Centre, 69120 Heidelberg, Germany.
Adrien FónagyCentre for Agricultural Sciences, Plant Protection Institute, 1022 Budapest, Hungary.
Zoltán AsztalosInstitute of Biochemistry, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Gábor SteinbachCellular Imaging Laboratory, Core Facility, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
Michal ŽurovecBiology Centre, Czech Academy of Sciences, 37005 České Budějovice, Czech Republic.
Imre BorosInstitute of Biochemistry, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.
István KissInstitute of Genetics, HUN-REN Biological Research Centre, 6726 Szeged, Hungary.

Funding

Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
European Community's Program Interreg Bayern Tschechische Republik BYCZ01-039German Research Foundation (DFG)-Hungarian Academy of Sciences (MTA) Collaboration Program UNG 436 113/81/0-6Hungarian Scientific Research Fund OTKA K69279NIH HHS P40 OD018537NKFIH 138128
6 · The paper itself

Abstract

One of the major functions of programmed cell death (apoptosis) is the removal of cells that suffered oncogenic mutations, thereby preventing cancerous transformation. By making use of a Double-Headed-EP (DEP) transposon, a P element derivative made in our laboratory, we made an insertional mutagenesis screen in Drosophila melanogaster to identify genes that, when overexpressed, suppress the p53-activated apoptosis. The DEP element has Gal4-activatable, outward-directed UAS promoters at both ends, which can be deleted separately in vivo. In the DEP insertion mutants, we used the GMR-Gal4 driver to induce transcription from both UAS promoters and tested the suppression effect on the apoptotic rough eye phenotype generated by an activated UAS-p53 transgene. By DEP insertions, 7 genes were identified, which suppressed the p53-induced apoptosis. In 4 mutants, the suppression effect resulted from single genes activated by 1 UAS promoter (Pka-R2, Rga, crol, and Spt5). In the other 3 (Orct2, Polr2M, and stg), deleting either UAS promoter eliminated the suppression effect. In qPCR experiments, we found that the genes in the vicinity of the DEP insertion also showed an elevated expression level. This suggested an additive effect of the nearby genes on suppressing apoptosis. In the eukaryotic genomes, there are coexpressed gene clusters. Three of the DEP insertion mutants are included, and 2 are in close vicinity of separate coexpressed gene clusters. This raises the possibility that the activity of some of the genes in these clusters may help the suppression of the apoptotic cell death.

Indexed as

ApoptosisDrosophila melanogasterDrosophila ProteinsMutagenesis, InsertionalTumor Suppressor Protein p53AnimalsDNA Transposable ElementsGenes, DominantGenes, SuppressorPhenotypePromoter Regions, GeneticDNA Transposable ElementsDrosophila Proteinsp53 protein, DrosophilaTumor Suppressor Protein p53activating insertional mutagenesisapoptosisDrosophilap53suppression

Identifiers

PMID38985658
PMCPMC11373661

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.