Evidence map›Paper›PMID 38985518›Full record

ArticleMolecular biology of the cell2024

Simple aneuploidy evades p53 surveillance and promotes niche factor-independent growth in human intestinal organoids.

Blake A Johnson, Albert Z Liu, Tianhao Bi, Yi Dong, Taibo Li, Dingjingyu Zhou, Akshay Narkar, Yufei Wu, Sean X Sun, Tatianna C Larman and 2 more

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Blake A JohnsonDepartment of Cell Biology, Johns Hopkins School of Medicine, Baltimore, MD 21205.
Albert Z LiuDepartment of Cell Biology, Johns Hopkins School of Medicine, Baltimore, MD 21205.
Tianhao BiDepartment of Cell Biology, Johns Hopkins School of Medicine, Baltimore, MD 21205.
Yi DongDepartment of Cell Biology, Johns Hopkins School of Medicine, Baltimore, MD 21205.
Taibo LiDepartment of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218.
Dingjingyu ZhouDepartment of Cell Biology, Johns Hopkins School of Medicine, Baltimore, MD 21205.
Akshay NarkarDepartment of Cell Biology, Johns Hopkins School of Medicine, Baltimore, MD 21205.
Yufei WuDepartment of Mechanical Engineering, Johns Hopkins University, Baltimore, MD 21218.
Sean X SunDepartment of Mechanical Engineering, Johns Hopkins University, Baltimore, MD 21218.
Tatianna C LarmanDepartment of Pathology, Division of Gastrointestinal/Liver Pathology, Johns Hopkins School of Medicine, Baltimore, MD 21205.
Jin ZhuMechanobiology Institute, National University of Singapore, Singapore 117411, Singapore.
Rong LiDepartment of Cell Biology, Johns Hopkins School of Medicine, Baltimore, MD 21205.

Funding

Medical Scientist Training ProgramT32GM136577 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI ANDREA L COX · 2020 to 2026
$13.4M
NIGMS NIH HHS T32 GM136577
6 · The paper itself

Abstract

Aneuploidy is nearly ubiquitous in tumor genomes, but the role of aneuploidy in the early stages of cancer evolution remains unclear. Here, by inducing heterogeneous aneuploidy in non-transformed human colon organoids (colonoids), we investigated how the effects of aneuploidy on cell growth and differentiation may promote malignant transformation. Previous work implicated p53 activation as a downstream response to aneuploidy induction. We found that simple aneuploidy, characterized by 1-3 gained or lost chromosomes, resulted in little or modest p53 activation and cell cycle arrest when compared with more complex aneuploid cells. Single-cell RNA sequencing analysis revealed that the degree of p53 activation was strongly correlated with karyotype complexity. Single-cell tracking showed that cells could continue to divide despite the observation of one to a few lagging chromosomes. Unexpectedly, colonoids with simple aneuploidy exhibited impaired differentiation after niche factor withdrawal. These findings demonstrate that simple aneuploid cells can escape p53 surveillance and may contribute to niche factor-independent growth of cancer-initiating colon stem cells.

Indexed as

AneuploidyCell DifferentiationCell ProliferationOrganoidsTumor Suppressor Protein p53Cell Cycle CheckpointsCell Transformation, NeoplasticColonHumansIntestinesNeoplastic Stem CellsTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID38985518
PMCPMC11321050

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.