Evidence map›Paper›PMID 38983567›Full record

ArticleFrontiers in ophthalmology2022

Mycobiomes of the Ocular Surface in Bacterial Keratitis Patients.

Rajagopalaboopathi Jayasudha, Sama Kalyana Chakravarthy, Gumpili Sai Prashanthi, Savitri Sharma, Prashant Garg, Somasheila I Murthy, Sisinthy Shivaji

Abstract read
In one paragraph

Article in Frontiers in ophthalmology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Rajagopalaboopathi JayasudhaProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute, Hyderabad, India.
Sama Kalyana ChakravarthyProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute, Hyderabad, India.
Gumpili Sai PrashanthiProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute, Hyderabad, India.
Savitri SharmaProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute, Hyderabad, India.
Prashant GargThe Cornea Institute, L V Prasad Eye Institute, Hyderabad, India.
Somasheila I MurthyThe Cornea Institute, L V Prasad Eye Institute, Hyderabad, India.
Sisinthy ShivajiProf. Brien Holden Eye Research Centre, L V Prasad Eye Institute, Hyderabad, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inflammation of the cornea is known as keratitis, and bacteria, fungi, protozoans, and viruses are the etiological agents of this disease. Delayed treatment of keratitis could result in loss of vision and, under certain severity conditions, the removal of an eye and its associated structures. In the current study, the ocular surface (conjunctiva and cornea) mycobiomes of individuals with bacterial keratitis were compared with the ocular mycobiome (conjunctiva) of healthy individuals, free of any ocular morbidity. Mycobiomes were generated through NGS approach using conjunctival swabs and corneal scrapings as the source of DNA from which ITS2 was amplified and sequenced, as a proxy to identify fungi. The results indicated significant changes in the alpha-diversity indices and in the abundance at the phylum and genera level. Hierarchical clustering using a heatmap showed that the mycobiomes were different. Furthermore, NMDS plots also differentiated the mycobiomes in the three cohorts, implying dysbiosis in the mycobiomes of the conjunctivae and corneal scrapings of bacterial keratitis individuals compared to control individuals. A preponderance of negative interactions in the hub genera in the conjunctival swabs of bacterial keratitis individuals compared to healthy controls further re-emphasized the differences in the mycobiomes. The dysbiotic changes at the genera level in conjunctivae and corneal scrapings of bacterial keratitis individuals are discussed with respect to their possible role in causing or exacerbating ocular surface inflammation. These results demonstrate dysbiosis in the ocular mycobiome in bacterial keratitis patients compared to healthy controls for the first time.

Indexed as

bacterial keratitisconjunctivacorneadysbiosisNGSocular mycobiome

Identifiers

PMID38983567
PMCPMC11182091

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