Evidence map›Paper›PMID 38982338›Full record

ArticleBMC infectious diseases2024

Rapid diagnosis of alveolar echinococcosis from lung puncture sample using metagenomic next-generation sequencing: a case report.

Chuanlin Zhou, Chunhong Li, Zhenfeng Deng, Xuexin Yan, Li Feng, Zhen Yang, Yanyan Lu, Yinglong Shi, Ke Wang, Jing Luo and 1 more

Abstract readCase Reports
In one paragraph

Article in BMC infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Chuanlin Zhou *Ward of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Guangxi Medical University, Nanning, People's Republic of China.
Chunhong Li *Infection Diagnosis Center, Guangxi KingMed Diagnostics, Nanning, People's Republic of China.
Zhenfeng DengInfection Diagnosis Center, Guangxi KingMed Diagnostics, Nanning, People's Republic of China.
Xuexin YanWard of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Guangxi Medical University, Nanning, People's Republic of China.
Li FengWard of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Guangxi Medical University, Nanning, People's Republic of China.
Zhen YangWard of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Guangxi Medical University, Nanning, People's Republic of China.
Yanyan LuWard of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Guangxi Medical University, Nanning, People's Republic of China.
Yinglong ShiWard of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Guangxi Medical University, Nanning, People's Republic of China.
Ke WangWard of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Guangxi Medical University, Nanning, People's Republic of China. keewang@hotmail.com.
Jing LuoWard of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Guangxi Medical University, Nanning, People's Republic of China. 66875350@qq.com.
Jinliang KongWard of Pulmonary and Critical Care Medicine, The First Affiliated Hospital of Guangxi Medical University, Nanning, People's Republic of China. kjl071@126.com.

Funding

China Postdoctoral Science Foundation 2023MD734158Health Commission of Guangxi Zhuang Autonomous Region Z20200825National Natural Science Foundation of China 82104499National Natural Science Foundation of China 82160783National Natural Science Foundation of China 82260023National Natural Science Foundation of Guangxi 2022GXNSFAA035646the Innovation Project of Clinical Research Climbing Plan of the First Affiliated Hospital of Guangxi Medical University YYZS2020016the Key Research Program of Guangxi Science and Technology Department AB21196010Youth talent fund project of GuangXi natural science foundation 2023GXNSFBA026146
6 · The paper itself

Abstract

introductionAlveolar echinococcosis (AE), caused by the larval forms of Echinococcus multilocularis, is a zoonotic disease affecting the liver, lungs, lymph nodes, kidneys, brain, bones, thyroid, and other organs. Diagnosing AE in a non-endemic area is usually challenging. With the rapid development and increasing application of sequencing techniques in recent years, metagenomic next-generation sequencing (mNGS) has become a powerful tool for diagnosing rare infectious diseases. CASE PRESENTATION: A 45-year-old woman was admitted to the hospital for the presence of pulmonary shadows for more than 3 months. The lung computed tomography (CT) at a local hospital revealed scattered solid and quasi-circular nodules in the left upper lobe, left lower lobe, right middle lobe, and right lower lobe. The largest nodule was located in the dorsal part of the right lung, measuring 2.0 × 1.7 × 1.5 cm. Moreover, abdominal CT revealed one space-occupying lesion each in the left and right lobes. The pathological analysis of the lung biopsy specimen revealed infiltration of lymphocytes, plasma cells, and eosinophils in the alveolar wall and interstitial area. No pathogenic bacteria were observed in the sputum smear and culture tests. There were no parasite eggs in the stool. The mNGS of the lung puncture tissue revealed 6156 sequence reads matching E. multilocularis; thus, the condition was diagnosed as AE. Albendazole 400 mg was administered twice daily, and the patient was stable during follow-up.

conclusionThis case emphasizes the role of mNGS in diagnosing AE. As a novel, sensitive, and accurate diagnostic method, mNGS could be an attractive approach for facilitating early diagnosis and prompt treatment of infectious diseases, especially when the infection was caused by rare pathogens.

Indexed as

EchinococcosisEchinococcus multilocularisHigh-Throughput Nucleotide SequencingLungMetagenomicsAlbendazoleAnimalsEchinococcosis, PulmonaryFemaleHumansMiddle AgedTomography, X-Ray ComputedAlbendazoleAlveolar echinococcosisCase reportDiagnoseEchinococcus multilocularisMetagenomic next-generation sequencing

Identifiers

PMID38982338
PMCPMC11232253

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.