Evidence map›Paper›PMID 38981885›Full record

ArticleArchives of virology2024

Complete genome sequence of a novel botourmiavirus infecting the fungus Phomopsis asparagi.

Jingyi Zhou, Shuang Liu, Yun Xu, Junhan Yan, Changping Xie, Li Zheng, Daipeng Chen

Abstract read
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In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Whole genome sequencing ofFrontiers in microbiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jingyi Zhou *School of Breeding and Multiplication (Sanya Institute of Breeding and Multiplication), Hainan University, Hainan Yazhou Bay Seed Laboratory, Sanya, 572025, China.
Shuang Liu *School of Breeding and Multiplication (Sanya Institute of Breeding and Multiplication), Hainan University, Hainan Yazhou Bay Seed Laboratory, Sanya, 572025, China.
Yun XuSchool of Life and Health, Hainan University, Haikou, Hainan, 570228, China.
Junhan YanSchool of Breeding and Multiplication (Sanya Institute of Breeding and Multiplication), Hainan University, Hainan Yazhou Bay Seed Laboratory, Sanya, 572025, China.
Changping XieSchool of Breeding and Multiplication (Sanya Institute of Breeding and Multiplication), Hainan University, Hainan Yazhou Bay Seed Laboratory, Sanya, 572025, China.
Li ZhengSchool of Breeding and Multiplication (Sanya Institute of Breeding and Multiplication), Hainan University, Hainan Yazhou Bay Seed Laboratory, Sanya, 572025, China.ORCID http://orcid.org/0000-0001-7335-4609
Daipeng ChenSchool of Breeding and Multiplication (Sanya Institute of Breeding and Multiplication), Hainan University, Hainan Yazhou Bay Seed Laboratory, Sanya, 572025, China. chen.daipeng@163.com.ORCID http://orcid.org/0009-0007-4352-6626

Funding

Hainan University XTCX2022NYB10Key Research and Development Project of Hainan Province ZDYF2022XDNY242National Natural Science Foundation of China 32260648National Natural Science Foundation of China 32370180
6 · The paper itself

Abstract

Here, we report a novel ourmia-like mycovirus, named "Phomopsis asparagi magoulivirus 1" (PaMV1), derived from the phytopathogenic fungus Phomopsis asparagi. The genome of PaMV1 consists of a positive-sense single-stranded RNA (+ ssRNA) that is 2,639 nucleotides in length, with a GC content of 57.13%. It contains a single open reading frame (ORF) encoding a putative RNA-dependent RNA polymerase (RdRp) consisting of 686 amino acids with a molecular mass of 78.57 kDa. Phylogenetic analysis based on RdRp sequences revealed that PaMV1 grouped together with Diaporthe gulyae magoulivirus 1 (DgMV1) in a distinct clade. Sequence comparisons and phylogenetic analysis suggest that PaMV1 is a novel member of the genus Magoulivirus, family Botourmiaviridae.

Indexed as

Fungal VirusesGenome, ViralOpen Reading FramesPhomopsisPhylogenyRNA, ViralBase CompositionBase SequencePlant DiseasesRNA-Dependent RNA PolymeraseRNA VirusesViral ProteinsWhole Genome SequencingRNA-Dependent RNA PolymeraseRNA, ViralViral Proteins

Identifiers

PMID38981885

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.