Evidence map›Paper›PMID 38980063›Full record

ArticleJournal of virology2024

Viroporin-like activity of the hairpin transmembrane domain of African swine fever virus B169L protein.

Douglas P Gladue, Lidia Gomez-Lucas, Eneko Largo, Elizabeth Ramirez-Medina, Johana Torralba, Maria Queralt-Martín, Antonio Alcaraz, Lauro Velazquez-Salinas, Jose L Nieva, Manuel V Borca

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Article in Journal of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Douglas P GladuePlum Island Animal Disease Center, ARS, USDA, Greenport, New York, USA.ORCID 0000-0002-7894-0233
Lidia Gomez-LucasInstituto Biofisika (CSIC-UPV/EHU) and Department of Biochemistry and Molecular Biology, University of the Basque Country, Bilbao, Spain.
Eneko LargoDepartment of Immunology, Microbiology and Parasitology, Faculty of Medicine and Nursing, University of the Basque Country (UPV/EHU), Leioa, Spain.
Elizabeth Ramirez-MedinaPlum Island Animal Disease Center, ARS, USDA, Greenport, New York, USA.
Johana TorralbaInstituto Biofisika (CSIC-UPV/EHU) and Department of Biochemistry and Molecular Biology, University of the Basque Country, Bilbao, Spain.
Maria Queralt-MartínLaboratory of Molecular Biophysics. Department of Physics, University Jaume I, Castello, Castellón, Spain.
Antonio AlcarazLaboratory of Molecular Biophysics. Department of Physics, University Jaume I, Castello, Castellón, Spain.
Lauro Velazquez-SalinasPlum Island Animal Disease Center, ARS, USDA, Greenport, New York, USA.
Jose L NievaInstituto Biofisika (CSIC-UPV/EHU) and Department of Biochemistry and Molecular Biology, University of the Basque Country, Bilbao, Spain.ORCID 0000-0001-6446-5649
Manuel V BorcaPlum Island Animal Disease Center, ARS, USDA, Greenport, New York, USA.ORCID 0000-0002-0888-1178

Funding

Basque Government IT1449-22
6 · The paper itself

Abstract

African swine fever virus (ASFV) is the causative agent of a contagious disease affecting wild and domestic swine. The function of B169L protein, as a potential integral structural membrane protein, remains to be experimentally characterized. Using state-of-the-art bioinformatics tools, we confirm here earlier predictions indicating the presence of an integral membrane helical hairpin, and further suggest anchoring of this protein to the ER membrane, with both terminal ends facing the lumen of the organelle. Our evolutionary analysis confirmed the importance of purifying selection in the preservation of the identified domains during the evolution of B169L in nature. Also, we address the possible function of this hairpin transmembrane domain (HTMD) as a class IIA viroporin. Expression of GFP fusion proteins in the absence of a signal peptide supported B169L insertion into the ER as a Type III membrane protein and the formation of oligomers therein. Overlapping peptides that spanned the B169L HTMD were reconstituted into ER-like membranes and the adopted structures analyzed by infrared spectroscopy. Consistent with the predictions, B169L transmembrane sequences adopted α-helical conformations in lipid bilayers. Moreover, single vesicle permeability assays demonstrated the assembly of lytic pores in ER-like membranes by B169L transmembrane helices, a capacity confirmed by ion-channel activity measurements in planar bilayers. Emphasizing the relevance of these observations, pore-forming activities were not observed in the case of transmembrane helices derived from EP84R, another ASFV protein predicted to anchor to membranes through a α-helical HTMD. Overall, our results support predictions of viroporin-like function for the B169L HTMD.IMPORTANCEAfrican swine fever (ASF), a devastating disease affecting domestic swine, is widely spread in Eurasia, producing significant economic problems in the pork industry. Approaches to prevent/cure the disease are mainly restricted to the limited information concerning the role of most of the genes encoded by the large (160-170 kba) virus genome. In this report, we present the experimental data on the functional characterization of the African swine fever virus (ASFV) gene B169L. Data presented here indicates that the B169L gene encodes for an essential membrane-associated protein with a viroporin function.

Indexed as

African Swine Fever VirusAfrican Swine FeverAmino Acid SequenceAnimalsEndoplasmic ReticulumProtein DomainsSwineViral ProteinsViroporin ProteinsViral ProteinsViroporin ProteinsAfrican swine feverAfrican swine fever virusASFASFVB169Lviroporin

Identifiers

PMID38980063
PMCPMC11334534

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.