Evidence map›Paper›PMID 38979432›Full record

ArticleJournal of inflammation research2024

Cuproptosis-Related Genes as Prognostic Biomarkers for Sepsis: Insights into Immune Function and Personalized Immunotherapy.

Jun Zhang, Yinyu Wu, Yuanlin Du, Yunxia Du, Daiqin Bao, Haibin Lu, Xiaoqiong Zhou, Rui Li, Haoyu Pei, Han She and 1 more

Abstract read
In one paragraph

Article in Journal of inflammation research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. The role of cuproptosis in gastric cancer.Frontiers in immunology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jun Zhang *Department of Anesthesiology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.
Yinyu Wu *Department of Anesthesiology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.ORCID 0009-0001-8232-808X
Yuanlin Du *Department of Anesthesiology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.
Yunxia DuDepartment of Anesthesiology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.
Daiqin BaoDepartment of Anesthesiology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.
Haibin LuDepartment of Intensive Care Unit, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.
Xiaoqiong ZhouDepartment of Anesthesiology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.ORCID 0000-0002-5253-7198
Rui LiDepartment of Anesthesiology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.ORCID 0009-0000-8719-0350
Haoyu PeiDepartment of Anesthesiology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.
Han SheDepartment of Anesthesiology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.ORCID 0000-0001-7497-6995
Qingxiang MaoDepartment of Anesthesiology, Daping Hospital, Army Medical University, Chongqing, 400042, People's Republic of China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: This study aimed to discover diagnostic and prognostic biomarkers for sepsis immunotherapy through analyzing the novel cellular death process, cuproptosis. Methods: We used transcriptome data from sepsis patients to identify key cuproptosis-related genes (CuRGs). We created a predictive model and used the CIBERSORT algorithm to observe the link between these genes and the septic immune microenvironment. We segregated sepsis patients into three subgroups, comparing immune function, immune cell infiltration, and differential analysis. Single-cell sequencing and real-time quantitative PCR were used to view the regulatory effect of CuRGs on the immune microenvironment and compare the mRNA levels of these genes in sepsis patients and healthy controls. We established a sepsis forecast model adapted to heart rate, body temperature, white blood cell count, and cuproptosis key genes. This was followed by a drug sensitivity analysis of cuproptosis key genes. Results: Our results filtered three key genes (LIAS, PDHB, PDHA1) that impact sepsis prognosis. We noticed that the high-risk group had poorer immune cell function and lesser immune cell infiltration. We also discovered a significant connection between CuRGs and immune cell infiltration in sepsis. Through consensus clustering, sepsis patients were classified into three subgroups. The best immune functionality and prognosis was observed in subgroup B. Single-cell sequencing exposed that the key genes manage the immune microenvironment by affecting T cell activation. The qPCR results highlighted substantial mRNA level reduction of the three key genes in the SP compared to the HC. The prediction model, which combines CuRGs and traditional diagnostic indicators, performed better in accuracy than the other markers. The drug sensitivity analysis listed bisphenol A as highly sensitive to all the key genes. Conclusion: Our study suggests these CuRGs may offer substantial potential for sepsis prognosis prediction and personalized immunotherapy.

Indexed as

cuproptosisimmune cell infiltrationnomogramprognosissepsis

Identifiers

PMID38979432
PMCPMC11228080

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.