Evidence map›Paper›PMID 38979184›Full record

ArticlebioRxiv : the preprint server for biology2024

RNA-seq gene expression profiling of the bladder in a mouse model of urogenital schistosomiasis.

Kenji Ishida, Derick N M Osakunor, Mario Rossi, Olivia K Lamanna, Evaristus C Mbanefo, James J Cody, Loc Le, Michael H Hsieh

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kenji IshidaSheikh Zayed Institute for Pediatric Surgical Innovation, Children's National Research Institute, Washington, District of Columbia, United States.ORCID 0000-0003-2170-6558
Derick N M OsakunorSheikh Zayed Institute for Pediatric Surgical Innovation, Children's National Research Institute, Washington, District of Columbia, United States.ORCID 0000-0002-4853-5384
Mario RossiDepartment of Biotechnological and Applied Clinical Sciences, University of L'Aquila, L'Aquila, Italy.ORCID 0000-0001-7004-0225
Olivia K LamannaSheikh Zayed Institute for Pediatric Surgical Innovation, Children's National Research Institute, Washington, District of Columbia, United States.ORCID 0000-0003-4479-6752
Evaristus C MbanefoNational Eye Institute, National Institutes of Health, Bethesda, Maryland, United States.ORCID 0000-0003-2636-3769
James J CodyCharles River Laboratories, Rockville, Maryland, United States.ORCID 0000-0002-2790-1760
Loc LeNational Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States.ORCID 0000-0002-3177-8662
Michael H HsiehSheikh Zayed Institute for Pediatric Surgical Innovation, Children's National Research Institute, Washington, District of Columbia, United States.ORCID 0000-0002-9650-2691

Funding

Therapeutic Exploitation of IPSE, a Urogenital Parasite-Derived Host Modulatory Protein, for Bladder Hypersensitivity SyndromesR01DK113504 · NIDDK · CHILDREN'S RESEARCH INSTITUTE · PI HSIEH, MICHAEL HARRISON · 2017 to 2021
$2.4M
Cancer Biology Training Program (CBTP)T32CA247756 · NCI · GEORGE WASHINGTON UNIVERSITY · PI LEE, NORMAN H, SETO, EDWARD · 2020 to 2024
$1.4M
NCI NIH HHS T32 CA247756NIAID NIH HHS HHSN272201700014CNIDDK NIH HHS R01 DK113504
6 · The paper itself

Abstract

Background: Parasitic flatworms of the Methods: We used a mouse model of Results/Conclusions: RNA-seq analysis of egg- and vehicle control-injected bladders revealed the differential expression of 1025 mouse genes in the egg-injected bladders, including genes associated with cellular infiltration, immune cell chemotaxis, cytokine signaling, and inflammation We also observed the upregulation of immune checkpoint-related genes, which suggests that while the infection causes an inflammatory response, it also dampens the response to avoid excessive inflammation-related damage to the host. Identifying these changes in host signaling and immune responses improves our understanding of the infection and how it may contribute to the development of bladder cancer. Analysis of the differential gene expression of the parasite eggs between bladder-injected versus uninjected eggs revealed 119

Identifiers

PMID38979184
PMCPMC11230422

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.