Evidence map›Paper›PMID 38978287›Full record

ArticleJournal of extracellular vesicles2024

Extracellular vesicle isolation methods identify distinct HIV-1 particles released from chronically infected T-cells.

Sebastian M Molnar, Yuriy Kim, Lindsay Wieczorek, Anastasia Williams, Kajal Ashok Patil, Pooja Khatkar, Mark F Santos, Gifty Mensah, Aurelio Lorico, Victoria R Polonis and 1 more

Abstract read
In one paragraph

Article in Journal of extracellular vesicles, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Sebastian M MolnarMilitary HIV-1 Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, USA.
Yuriy KimLaboratory of Molecular Virology, School of System Biology, George Mason University, Manassas, Virginia, USA.ORCID https://orcid.org/0000-0001-8658-6863
Lindsay WieczorekMilitary HIV-1 Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, USA.
Anastasia WilliamsLaboratory of Molecular Virology, School of System Biology, George Mason University, Manassas, Virginia, USA.
Kajal Ashok PatilLaboratory of Molecular Virology, School of System Biology, George Mason University, Manassas, Virginia, USA.
Pooja KhatkarLaboratory of Molecular Virology, School of System Biology, George Mason University, Manassas, Virginia, USA.
Mark F SantosCollege of Medicine, Touro University Nevada, Henderson, Nevada, USA.
Gifty MensahLaboratory of Molecular Virology, School of System Biology, George Mason University, Manassas, Virginia, USA.
Aurelio LoricoCollege of Medicine, Touro University Nevada, Henderson, Nevada, USA.
Victoria R PolonisMilitary HIV-1 Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, USA.
Fatah KashanchiLaboratory of Molecular Virology, School of System Biology, George Mason University, Manassas, Virginia, USA.

Funding

HIV1 INHIBITION USING TAT PEPTIDE DERIVATIVESR01AI043894 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI KASHANCHI, FATAH · 1999 to 2015
$4.4M
Cell-derived extracellular vesicle mediated epigenetic silencing of HIV in the brainR01MH134389 · NIMH · GEORGE MASON UNIVERSITY · PI Fatah Kashanchi · 2023 to 2026
$2.0M
HIV neuropathogenesis related to exosomes containing HIV non-coding RNAsR01NS099029 · NINDS · GEORGE MASON UNIVERSITY · PI KASHANCHI, FATAH · 2016 to 2020
$1.9M
Effect of chromatin remodelers/modifiers on HIV-1 Tat activated transcriptionR21AI074410 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI KASHANCHI, FATAH · 2009 to 2010
$432k
A radiation-induced cellular stress activates HIV and induces killing of infected cellsR21AI127351 · NIAID · GEORGE MASON UNIVERSITY · PI KASHANCHI, FATAH · 2016 to 2017
$418k
HIV-1 TAR derived miRNA: Implications for Latency and PathogenesisR21AI078859 · NIAID · GEORGE WASHINGTON UNIVERSITY · PI KASHANCHI, FATAH · 2009 to 2010
$400k
Henry M. Jackson Foundation W81XWH-11-2-0174NIAID NIH HHS R01 AI043894NIAID NIH HHS R21 AI074410NIAID NIH HHS R21 AI078859NIAID NIH HHS R21 AI127351NIH HHS AI043894NIH HHS AI074410NIH HHS AI078859NIH HHS AI127351-01NIH HHS MH134389NIH HHS NS099029NIMH NIH HHS R01 MH134389NINDS NIH HHS R01 NS099029
6 · The paper itself

Abstract

The current study analyzed the intersecting biophysical, biochemical, and functional properties of extracellular particles (EPs) with the human immunodeficiency virus type-1 (HIV-1) beyond the currently accepted size range for HIV-1. We isolated five fractions (Frac-A through Frac-E) from HIV-infected cells by sequential differential ultracentrifugation (DUC). All fractions showed a heterogeneous size distribution with median particle sizes greater than 100 nm for Frac-A through Frac-D but not for Frac-E, which contained small EPs with an average size well below 50 nm. Synchronized and released cultures contained large infectious EPs in Frac-A, with markers of amphisomes and viral components. Additionally, Frac-E uniquely contained EPs positive for CD63, HSP70, and HIV-1 proteins. Despite its small average size, Frac-E contained membrane-protected viral integrase, detectable only after SDS treatment, indicating that it is enclosed in vesicles. Single particle analysis with dSTORM further supported these findings as CD63, HIV-1 integrase, and the viral surface envelope (Env) glycoprotein (gp) colocalized on the same Frac-E particles. Surprisingly, Frac-E EPs were infectious, and infectivity was significantly reduced by immunodepleting Frac-E with anti-CD63, indicating the presence of this protein on the surface of infectious small EPs in Frac-E. To our knowledge, this is the first time that extracellular vesicle (EV) isolation methods have identified infectious small HIV-1 particles (

Indexed as

Extracellular VesiclesHIV-1HIV InfectionsHumansParticle SizeTetraspanin 30T-LymphocytesUltracentrifugationVirionTetraspanin 30amphisomescARTexomeresexosomesextracellular particlesextracellular vesiclesHIV‐1NRTIssmall HIVsmHIV‐1

Identifiers

PMID38978287
PMCPMC11231049

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.