Evidence map›Paper›PMID 38977720›Full record

ArticleScientific reports2024

Identification of plant based potential antifungal compounds against BMK-1 protein of Bipolaris oryzae using molecular docking approach.

Sheeba Bhat, Mariya Rather, Saima Gani, Asha Nabi, Shabir Ahmad Ganai, Mehraj D Shah, Parvaze Sofi, Fehim Jeelani, Arif Hussain, Sabiha Ashraf and 5 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Sheeba BhatDivision of Plant Pathology, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Wadura, Sopore, Jammu and Kashmir, 193201, India.
Mariya RatherDivision of Plant Pathology, Faculty of Horticulture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Saima GaniDivision of Plant Pathology, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Wadura, Sopore, Jammu and Kashmir, 193201, India.
Asha NabiDivision of Plant Pathology, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Wadura, Sopore, Jammu and Kashmir, 193201, India. aishakabli@yahoo.in.
Shabir Ahmad GanaiResearch Centre for Residue and Quality Analysis, Faculty of Horticulture, Sher-e-Kashmir University of Agricultural Sciences and Technology, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Mehraj D ShahDivision of Plant Pathology, Faculty of Horticulture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Parvaze SofiDivision of Genetics and Plant Breeding, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Wadura, Sopore, Jammu and Kashmir, 193201, India.
Fehim JeelaniDivision of Agri-Economics and Statistics, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Wadura, Sopore, Jammu and Kashmir, 193201, India.
Arif HussainDivision of Horticulture, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Wadura, Sopore, Jammu and Kashmir, 193201, India.
Sabiha AshrafCollege of Temperate Sericulture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Mirgund, Jammu and Kashmir, 193121, India.
Ali AnwarDivision of Plant Pathology, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Wadura, Sopore, Jammu and Kashmir, 193201, India.
Iram IqbalDivision of Plant Pathology, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Wadura, Sopore, Jammu and Kashmir, 193201, India.
Tawkeer Un NisaDivision of Plant Pathology, Faculty of Agriculture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Wadura, Sopore, Jammu and Kashmir, 193201, India.
Baby SummunaDirectorate of Research, Faculty of Horticulture, Sher-e-Kashmir University of Agricultural Sciences and Technology of Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.
Saba BandayDivision of Plant Pathology, Faculty of Horticulture, Sher-e-Kashmir University of Agricultural Sciences and Technology-Kashmir, Shalimar, Srinagar, Jammu and Kashmir, 190025, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice brown spot is an important disease of rice worldwide that inflicts substantial yield losses. The antimicrobial potential of methanol, acetone and dimethyl sulfoxide (DMSO) extracts of different medicinal plants, viz., Syzygium aromaticum, Saussurea costus, Acorus calamus, Bergenia ciliate, Geranium pratense, Mentha longifolia, Inula racemosa, Podophyllum hexandrum, Heracleum candicans and Picrorhiza kurroa, against the brown spot pathogen Bipolaris oryzae in vitro was evaluated via mycelial growth inhibition and spore germination inhibition assays. Among the plant extracts tested, 100% mycelial inhibition was observed for the methanol extract of Syzygium aromaticum at all three concentrations (2000 ppm, 3000 ppm and 4000 ppm), followed by the methanol extract of Inula racemosa (90.33%) at 4000 ppm. A maximum conidial germination inhibition of 83.54% was exhibited by the Heracleum candicans leaf extract. Phytochemical profiling of Syzygium aromaticum and Inula racemosa through liquid chromatography and mass spectrometry (HR-LCMS) revealed the presence of several compounds, such as eugenol, ursolic acid, quercetin, chlorogenic acid, and noscapine. A molecular docking approach was used to identify key inhibitory molecules against B. oryzae. Among the compounds detected in S. aromaticum and Inula racemosa, ursolic acid and noscapine were found to have the greatest binding affinity for the Big Mitogen Activated Protein Kinase (BMK-1) enzyme present in B. oryzae. In conclusion, S. aromaticum and Inula racemosa are potent compounds that could serve as lead compounds for drug discovery in the future.

Indexed as

Antifungal AgentsMolecular Docking SimulationPlant ExtractsAscomycotaFungal ProteinsOryzaPlant DiseasesPlants, MedicinalAntifungal AgentsFungal ProteinsPlant ExtractsBipolaris oryzaeCloveInula racemosaNoscapinePlant extractsUrsolic acid

Identifiers

PMID38977720
PMCPMC11231321

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.