Evidence map›Paper›PMID 38977669›Full record

ArticleNature communications2024

Inhibition of topoisomerase 2 catalytic activity impacts the integrity of heterochromatin and repetitive DNA and leads to interlinks between clustered repeats.

Michalis Amoiridis, John Verigos, Karen Meaburn, William H Gittens, Tao Ye, Matthew J Neale, Evi Soutoglou

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. The Roles of Topoisomerases in Transcriptional Regulation.International journal of molecular sciences · 2026
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Genome Instability Induced by Topoisomerase Misfunction.International journal of molecular sciences · 2024
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Michalis AmoiridisGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Brighton, BN1 9RH, UK.ORCID 0009-0000-2161-3162
John VerigosGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Brighton, BN1 9RH, UK.
Karen MeaburnGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Brighton, BN1 9RH, UK.
William H GittensGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Brighton, BN1 9RH, UK.
Tao YeInstitut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Illkirch, France.ORCID 0000-0002-3394-2083
Matthew J NealeGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Brighton, BN1 9RH, UK.ORCID 0000-0002-6453-1877
Evi SoutoglouGenome Damage and Stability Centre, School of Life Sciences, University of Sussex, Brighton, BN1 9RH, UK. E.Soutoglou@sussex.ac.uk.ORCID 0000-0002-3724-5613

Funding

Wellcome Trust 200843/Z/16/Z
6 · The paper itself

Abstract

DNA replication and transcription generate DNA supercoiling, which can cause topological stress and intertwining of daughter chromatin fibers, posing challenges to the completion of DNA replication and chromosome segregation. Type II topoisomerases (Top2s) are enzymes that relieve DNA supercoiling and decatenate braided sister chromatids. How Top2 complexes deal with the topological challenges in different chromatin contexts, and whether all chromosomal contexts are subjected equally to torsional stress and require Top2 activity is unknown. Here we show that catalytic inhibition of the Top2 complex in interphase has a profound effect on the stability of heterochromatin and repetitive DNA elements. Mechanistically, we find that catalytically inactive Top2 is trapped around heterochromatin leading to DNA breaks and unresolved catenates, which necessitate the recruitment of the structure specific endonuclease, Ercc1-XPF, in an SLX4- and SUMO-dependent manner. Our data are consistent with a model in which Top2 complex resolves not only catenates between sister chromatids but also inter-chromosomal catenates between clustered repetitive elements.

Indexed as

DNA Topoisomerases, Type IIHeterochromatinAnimalsDNADNA-Binding ProteinsDNA ReplicationDNA, SuperhelicalHumansInterphaseMicePoly-ADP-Ribose Binding ProteinsRepetitive Sequences, Nucleic AcidTopoisomerase II InhibitorsDNADNA-Binding ProteinsDNA, SuperhelicalDNA Topoisomerases, Type IIHeterochromatinPoly-ADP-Ribose Binding ProteinsTopoisomerase II Inhibitors

Identifiers

PMID38977669
PMCPMC11231352

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.