Evidence map›Paper›PMID 38977374›Full record

Observational studyThorax2024

TB PCR in BAL and EBUS-TBNA samples for the diagnosis of pulmonary and mediastinal lymph node TB: retrospective TRiBE study.

Mirae Park, Kartik Kumar, Meg Coleman, Laura Martin, Georgina Russell, Pauline Scheelbeek, Ajit Lalvani, Giovanni Satta, Onn Min Kon

Abstract readObservational Study
In one paragraph

Observational study in Thorax, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Mirae ParkDepartment of Respiratory Medicine, St Mary's Hospital, Imperial College Healthcare NHS Trust, London, UK onn.kon@imperial.ac.uk mirae.park@nhs.net.ORCID 0000-0002-7015-5943
Kartik KumarDepartment of Respiratory Medicine, St Mary's Hospital, Imperial College Healthcare NHS Trust, London, UK.ORCID 0000-0002-3142-5795
Meg ColemanDepartment of Respiratory Medicine, St Mary's Hospital, Imperial College Healthcare NHS Trust, London, UK.ORCID 0000-0002-1298-5156
Laura MartinDepartment of Respiratory Medicine, St Mary's Hospital, Imperial College Healthcare NHS Trust, London, UK.
Georgina RussellDepartment of Respiratory Medicine, St Mary's Hospital, Imperial College Healthcare NHS Trust, London, UK.
Pauline ScheelbeekLondon School of Hygiene and Tropical Medicine, London, UK.
Ajit LalvaniTuberculosis Research Unit, Imperial College London, London, UK.
Giovanni SattaUniversity College Hospitals London NHS Foundation Trust, London, UK.
Onn Min KonDepartment of Respiratory Medicine, St Mary's Hospital, Imperial College Healthcare NHS Trust, London, UK onn.kon@imperial.ac.uk mirae.park@nhs.net.ORCID 0000-0003-2647-4688

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionThe role of Xpert Ultra in bronchoalveolar lavage (BAL) and endobronchial ultrasound-guided transbronchial needle aspiration (EBUS-TBNA) samples for pulmonary and mediastinal lymph node tuberculosis (TB) remains unclear.

methodsThis was a retrospective observational service evaluation at a tertiary TB centre in a low-incidence setting. The diagnostic indices of Xpert Ultra, smear and culture (with cytology for EBUS-TBNA samples) were compared with culture positivity or a composite reference standard of clinical TB diagnosis. Trace readouts, a new category of results for Xpert Ultra indicating low bacillary load, were analysed in two ways as a true positive or true negative result. 282 BAL and 139 EBUS-TBNA samples were included in the analysis.

resultsBAL: sensitivity with 95% CI against culture-confirmed pulmonary TB from BAL samples for Xpert Ultra (trace as positive) was 0.91 (0.82 to 0.98), Xpert Ultra (trace as negative) was 0.76 (0.69 to 0.83), smear was 0.38 (p=0.0009) and culture was 1.00 (0.91 to 1.00). Specificities for all the tests were ≥0.99 (0.98 to 1.00). The addition of smear to Xpert Ultra did not improve the diagnostic accuracy.EBUS-TBNA: sensitivity against culture-confirmed TB from EBUS-TBNA samples for Xpert Ultra (trace as positive) was 0.71 (0.63 to 0.78), Xpert Ultra (trace as negative) was 0.59 (0.54 to 0.63), smear was 0.12 (p=0.002), culture was 1.00 (0.89 to 1.00), cytology was 0.87 (0.76 to 0.98) and rapid on-site evaluation of cytology (ROSE) was 0.92 (0.78 to 1.00). Specificities were 0.99 (0.97 to 1.00), 0.99 (0.97 to 1.00), 1.00 (0.98 to 1.00), 1.00 (0.98 to 1.00), 0.67 (0.67 to 0.68) and 0.42, respectively.

conclusionXpert Ultra had a significantly higher sensitivity compared with smear in both BAL and EBUS-TBNA samples. Xpert Ultra had a lower sensitivity compared with culture but comparable specificity with results being available within <24 hours. Trace readings in our low-incidence setting were associated with culture positivity in all BAL samples.

Indexed as

Bronchoalveolar Lavage FluidEndoscopic Ultrasound-Guided Fine Needle AspirationTuberculosis, Lymph NodeTuberculosis, PulmonaryAdultAgedFemaleHumansLymph NodesMaleMediastinumMiddle AgedMycobacterium tuberculosisPolymerase Chain ReactionRetrospective StudiesSensitivity and SpecificityBronchoscopyRespiratory InfectionTuberculosis

Identifiers

PMID38977374
PMCPMC11347229

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.