Evidence map›Paper›PMID 38976670›Full record

ArticlePloS one2024

hnRNP Q/SYNCRIP interacts with LIN28B and modulates the LIN28B/let-7 axis in human hepatoma cells.

Jason Jei-Sheng Chang, Ti Lin, Xin-Yue Jhang, Shih-Peng Chan

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In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jason Jei-Sheng ChangGraduate Institute of Microbiology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Ti LinGraduate Institute of Microbiology, College of Medicine, National Taiwan University, Taipei, Taiwan.ORCID 0009-0001-7052-223X
Xin-Yue JhangGraduate Institute of Microbiology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Shih-Peng ChanGraduate Institute of Microbiology, College of Medicine, National Taiwan University, Taipei, Taiwan.ORCID 0000-0001-6322-2821

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The RNA-binding protein LIN28B represses the biogenesis of the tumor suppressor let-7. The LIN28B/let-7 axis regulates cell differentiation and is associated with various cancers. The RNA-binding protein Q (hnRNP Q) or SYNCRIP (Synaptotagmin Binding Cytoplasmic RNA Interacting Protein) has been implicated in mRNA splicing, mRNA transport, translation, and miRNAs biogenesis as well as metabolism in cancer. To determine whether hnRNP Q plays a role in the LIN28B/let-7 axis, we tested for interactions between hnRNP Q and LIN28B. We demonstrated that hnRNP Q interacts with LIN28B in an RNA-dependent manner. Knockdown of hnRNP Q caused reduced expression of a well-known let-7 target TRIM71, an E3 ubiquitin ligase that belongs to the RBCC/TRIM family, and also LIN28B, whose mRNA itself is down-regulated by let-7. In addition, hnRNP Q knockdown increased let-7 family miRNA levels and reduced the activity of luciferase reporters fused with the TRIM71 3'UTR or a synthetic 3'UTR carrying 8X let-7 complementary sites. Finally, depletion of hnRNP Q inhibited the proliferation of a hepatocellular carcinoma cell line, Huh7. This observation is consistent with the survival curve for liver cancer patients from the TCGA database, which indicates that high expression of hnRNP Q is a prognostic marker for a poor outcome in individuals afflicted with hepatocellular carcinoma. Together, our findings suggest that hnRNP Q interacts with LIN28B and modulates the LIN28B/let-7 axis in hepatocellular carcinoma.

Indexed as

Carcinoma, HepatocellularHeterogeneous-Nuclear RibonucleoproteinsLiver NeoplasmsMicroRNAsRNA-Binding Proteins3' Untranslated RegionsCell Line, TumorCell ProliferationGene Expression Regulation, NeoplasticHumansProtein Binding3' Untranslated RegionsHeterogeneous-Nuclear RibonucleoproteinsLIN28B protein, humanMicroRNAsmirnlet7 microRNA, humanRNA-Binding ProteinsSYNCRIP protein, human

Identifiers

PMID38976670
PMCPMC11230530

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.