Evidence map›Paper›PMID 38976579›Full record

ArticlePlant physiology2024

Cell wall integrity modulates HOOKLESS1 and PHYTOCHROME INTERACTING FACTOR4 expression controlling apical hook formation.

Riccardo Lorrai, Özer Erguvan, Sara Raggi, Kristoffer Jonsson, Jitka Široká, Danuše Tarkowská, Ondřej Novák, Jayne Griffiths, Alexander M Jones, Stéphane Verger and 2 more

Abstract read
In one paragraph

Article in Plant physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Riccardo LorraiDipartimento di Biologia e biotecnologie "Charles Darwin", Sapienza Università di Roma, 00185 Rome, Italy.ORCID 0000-0001-8142-956X
Özer ErguvanUmeå Plant Science Centre (UPSC), Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83 Umeå, Sweden.ORCID 0000-0002-6873-9341
Sara RaggiUmeå Plant Science Centre (UPSC), Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83 Umeå, Sweden.ORCID 0000-0002-7925-5772
Kristoffer JonssonIRBV, Department of Biological Sciences, University of Montreal, QC H1X 2B2 Montreal, Quebec, Canada.ORCID 0000-0001-7445-7378
Jitka ŠirokáLaboratory of Growth Regulators, Institute of Experimental Botany, Czech Academy of Sciences and Faculty of Science, Palacký University Olomouc, CZ-77900 Olomouc, Czech Republic.ORCID 0000-0002-4988-2919
Danuše TarkowskáLaboratory of Growth Regulators, Institute of Experimental Botany, Czech Academy of Sciences and Faculty of Science, Palacký University Olomouc, CZ-77900 Olomouc, Czech Republic.ORCID 0000-0003-1478-1904
Ondřej NovákLaboratory of Growth Regulators, Institute of Experimental Botany, Czech Academy of Sciences and Faculty of Science, Palacký University Olomouc, CZ-77900 Olomouc, Czech Republic.ORCID 0000-0003-3452-0154
Jayne GriffithsSainsbury Laboratory, University of Cambridge, CB2 1LR Cambridge, UK.ORCID 0000-0002-6210-7677
Alexander M JonesSainsbury Laboratory, University of Cambridge, CB2 1LR Cambridge, UK.ORCID 0000-0002-3662-2915
Stéphane VergerUmeå Plant Science Centre (UPSC), Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83 Umeå, Sweden.ORCID 0000-0003-3643-3978
Stéphanie RobertUmeå Plant Science Centre (UPSC), Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, 901 83 Umeå, Sweden.ORCID 0000-0002-0013-3239
Simone FerrariDipartimento di Biologia e biotecnologie "Charles Darwin", Sapienza Università di Roma, 00185 Rome, Italy.ORCID 0000-0002-1389-2090

Funding

Bio4EnergyCzech Science Foundation 22-17435SEuropean Regional Development Fund CZ.02.01.01/00/22/_008/0004581European Research CouncilEuropean Union Next-GenerationEUEuropean Union's Horizon 2020 research and innovation program 759282Gatsby Charitable trust GAT3395Italian Ministry of University and ResearchKnut and Alice Wallenberg Foundation KAW 2016.0341Ministry of EducationRegione Lazio A0375-2020-36720Research Group Projects 2020Sapienza University of Rome AR22117A5E76C7EEStrategic Research Area initiativeSwedish Government'Swedish Governmental Agency for Innovation Systems VINNOVA 2016-00504Vetenskapsrådet VR-2020-03420Youth and Sports of the Czech Republic
6 · The paper itself

Abstract

Formation of the apical hook in etiolated dicot seedlings results from differential growth in the hypocotyl apex and is tightly controlled by environmental cues and hormones, among which auxin and gibberellins (GAs) play an important role. Cell expansion is tightly regulated by the cell wall, but whether and how feedback from this structure contributes to hook development are still unclear. Here, we show that etiolated seedlings of the Arabidopsis (Arabidopsis thaliana) quasimodo2-1 (qua2) mutant, defective in pectin biosynthesis, display severe defects in apical hook formation and maintenance, accompanied by loss of asymmetric auxin maxima and differential cell expansion. Moreover, qua2 seedlings show reduced expression of HOOKLESS1 (HLS1) and PHYTOCHROME INTERACTING FACTOR4 (PIF4), which are positive regulators of hook formation. Treatment of wild-type seedlings with the cellulose inhibitor isoxaben (isx) also prevents hook development and represses HLS1 and PIF4 expression. Exogenous GAs, loss of DELLA proteins, or HLS1 overexpression partially restore hook development in qua2 and isx-treated seedlings. Interestingly, increased agar concentration in the medium restores, both in qua2 and isx-treated seedlings, hook formation, asymmetric auxin maxima, and PIF4 and HLS1 expression. Analyses of plants expressing a Förster resonance energy transfer-based GA sensor indicate that isx reduces accumulation of GAs in the apical hook region in a turgor-dependent manner. Lack of the cell wall integrity sensor THESEUS 1, which modulates turgor loss point, restores hook formation in qua2 and isx-treated seedlings. We propose that turgor-dependent signals link changes in cell wall integrity to the PIF4-HLS1 signaling module to control differential cell elongation during hook formation.

Indexed as

ArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsCell WallGene Expression Regulation, PlantIndoleacetic AcidsSeedlingsBenzamidesGibberellinsHypocotylMutationPectinsArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsBenzamidesGibberellinsIndoleacetic AcidsisoxabenPectinsPIF4 protein, Arabidopsis

Identifiers

PMID38976579
PMCPMC11444296

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.