Evidence map›Paper›PMID 38975986›Full record

ArticleJournal of chemical theory and computation2024

Capturing the Effects of Single Atom Substitutions on the Inhibition Efficiency of Glycogen Synthase Kinase-3β Inhibitors via Markov State Modeling and Experiments.

Ramin Mehrani, Jagannath Mondal, Davoud Ghazanfari, Douglas J Goetz, Kelly D McCall, Stephen C Bergmeier, Sumit Sharma

Abstract read
In one paragraph

Article in Journal of chemical theory and computation, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ramin MehraniDepartment of Mechanical Engineering, Ohio University, Athens, Ohio 45701, United States.
Jagannath MondalCenter for Interdisciplinary Sciences, Tata Institute of Fundamental Research, Hyderabad 500046, India.ORCID 0000-0003-1090-5199
Davoud GhazanfariDepartment of Chemical and Biomolecular Engineering, Ohio University, Athens, Ohio 45701, United States.
Douglas J GoetzDepartment of Chemical and Biomolecular Engineering, Ohio University, Athens, Ohio 45701, United States.
Kelly D McCallBiomedical Engineering Program, Ohio University, Athens, Ohio 45701, United States.
Stephen C BergmeierBiomedical Engineering Program, Ohio University, Athens, Ohio 45701, United States.ORCID 0000-0003-3891-8442
Sumit SharmaDepartment of Chemical and Biomolecular Engineering, Ohio University, Athens, Ohio 45701, United States.ORCID 0000-0003-3138-5487

Funding

Novel Glycogen Synthase Kinase-3 (GSK-3) Inhibitors as Therapeutic AgentsR15GM110602 · NIGMS · OHIO UNIVERSITY ATHENS · PI GOETZ, DOUGLAS J · 2016 to 2025
$1.5M
NIGMS NIH HHS R15 GM110602
6 · The paper itself

Abstract

Small modifications in the chemical structure of ligands are known to dramatically change their ability to inhibit the activity of a protein. Unraveling the mechanisms that govern these dramatic changes requires scrutinizing the dynamics of protein-ligand binding and unbinding at the atomic level. As an exemplary case, we have studied Glycogen Synthase Kinase-3β (GSK-3β), a multifunctional kinase that has been implicated in a host of pathological processes. As such, there is a keen interest in identifying ligands that inhibit GSK-3β activity. One family of compounds that are highly selective and potent inhibitors of GSK-3β is exemplified by a molecule termed COB-187. COB-187 consists of a five-member heterocyclic ring with a thione at C

Indexed as

Glycogen Synthase Kinase 3 betaMolecular Dynamics SimulationProtein Kinase InhibitorsHumansLigandsMarkov ChainsPyridinesThermodynamicsGlycogen Synthase Kinase 3 betaLigandsProtein Kinase InhibitorsPyridines

Identifiers

PMID38975986
PMCPMC11776921

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.