Evidence map›Paper›PMID 38973430›Full record

ReviewExpert review of molecular diagnostics2024

Point-of-care isothermal nucleic acid amplification tests: progress and bottlenecks for extraction-free sample collection and preparation.

Alexis F Wilkinson, Maria J Barra, Emilie N Novak, Meaghan Bond, Rebecca Richards-Kortum

Abstract readReview
In one paragraph

Review in Expert review of molecular diagnostics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  13. Multiplex on-chip detection ofFrontiers in bioengineering and biotechnology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alexis F WilkinsonDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID 0000-0002-7890-9818
Maria J BarraDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID 0000-0002-7195-5133
Emilie N NovakDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID 0000-0002-2234-8214
Meaghan BondRice360 Institute for Global Health Technologies, Rice University, Houston, TX, USA.ORCID 0000-0002-6360-8107
Rebecca Richards-KortumDepartment of Bioengineering, Rice University, Houston, TX, USA.ORCID 0000-0003-2347-9467

Funding

The Center for Innovation and Translation of Point of Care Technologies for Expanded Cancer Care (CITEC) - Administrative CoreU54EB034652 · NIBIB · RICE UNIVERSITY · PI Sharmila Anandasabapathy, Rebecca R. Richards-Kortum · 2023 to 2026
$6.5M
A Sample-to-Answer Point-of-Care Diagnostic for Recently Transfused Sickle Cell Anemia Patients in Low Resource SettingsR01HL166413 · NHLBI · RICE UNIVERSITY · PI Rebecca R. Richards-Kortum · 2023 to 2026
$2.4M
NHLBI NIH HHS R01 HL166413NIBIB NIH HHS U54 EB034652
6 · The paper itself

Abstract

introductionSuitable sample collection and preparation methods are essential to enable nucleic acid amplification testing at the point of care (POC). Strategies that allow direct isothermal nucleic acid amplification testing (iNAAT) of crude sample lysate without the need for nucleic acid extraction minimize time to result as well as the need for operator expertise and costly infrastructure. AREAS COVERED: The authors review research to understand how sample matrix and preparation affect the design and performance of POC iNAATs. They focus on approaches where samples are directly combined with liquid reagents for preparation and amplification via iNAAT strategies. They review factors related to the type and method of sample collection, storage buffers, and lysis strategies. Finally, they discuss RNA targets and relevant regulatory considerations. EXPERT OPINION: Limitations in sample preparation methods are a significant technical barrier preventing implementation of nucleic acid testing at the POC. The authors propose a framework for co-designing sample preparation and amplification steps for optimal performance with an extraction-free paradigm by considering a sample matrix and lytic strategy prior to an amplification assay and readout. In the next 5 years, the authors anticipate increasing priority on the co-design of sample preparation and iNAATs.

Indexed as

Molecular Diagnostic TechniquesNucleic Acid Amplification TechniquesPoint-of-Care TestingSpecimen HandlingHumansPoint-of-Care Systemsloop-mediated isothermal amplificationnucleic acid amplificationpoint-of-carerecombinase polymerase amplificationsample preparation

Identifiers

PMID38973430
PMCPMC11514575

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.