Evidence map›Paper›PMID 38972951›Full record

ArticleWorld journal of microbiology & biotechnology2024

Pseudomonas aeruginosa PR23 isolated from oil contaminated soil tolerate and degrades mixture of polyaromatic hydrocarbons and express novel proteins.

Shanky Jindal, Kamal Krishan Aggarwal

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Article in World journal of microbiology & biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Shanky JindalUniversity School of Biotechnology, Guru Gobind Singh Indraprastha University, Sec 16C Dwarka, New Delhi, 110078, India.ORCID http://orcid.org/0000-0003-2856-3924
Kamal Krishan AggarwalUniversity School of Biotechnology, Guru Gobind Singh Indraprastha University, Sec 16C Dwarka, New Delhi, 110078, India. kkaggarwal@ipu.ac.in.ORCID http://orcid.org/0000-0002-3792-9062

Funding

FRGS, Guru Gobind Singh Indraprastha University GGSIPU/DRC/FRGS/2020/1988/22 and GGSIPU/DRC/FRGS/2021/594/19
6 · The paper itself

Abstract

Pseudomonas aeruginosa PR23 isolated from the hydrocarbon contaminated soil can tolerate and degrade mixture of polyaromatic hydrocarbons (PAHs) at an initial concentration of 1300 ppm. The degradation and intermediates formed were assessed by gas chromatography-mass spectrometry (GC-MS) analysis. The isolated strain was able to degrade 59.2% of the mixture of PAHs in 3 days and 71.6% by day 15. Effect of PAHs on protein expression in Pseudomonas aeruginosa PR23 was studied using nano LC-MS/MS. Thirty-six proteins showed a more than 2-fold increase in expression in the presence of mixture of PAHs. Out of these proteins, 7 proteins have been reported for their role in degradation of naphthalene, phenanthrene, and pyrene. The data revealed the presence of 16 proteins that were uniquely expressed in the presence of mixture of PAHs. A twin-arginine translocation signal peptide (Tat system), known for the transportation of folded proteins across the cell membrane, showed more than 8-fold increased expression in the presence of mixture of PAHs. These results indicate that the isolated strain adopts the conditions in the presence of mixture of PAHs by modulating its metabolic and physiological processes. These findings suggest that Pseudomonas aeruginosa PR23 may be a suitable candidate for use in the development of strategies for bioremediation of mixtures of PAHs.

Indexed as

Bacterial ProteinsBiodegradation, EnvironmentalPolycyclic Aromatic HydrocarbonsPseudomonas aeruginosaSoil MicrobiologySoil PollutantsGas Chromatography-Mass SpectrometryNaphthalenesPhenanthrenesTandem Mass SpectrometryBacterial ProteinsnaphthaleneNaphthalenesphenanthrenePhenanthrenesPolycyclic Aromatic HydrocarbonsSoil PollutantsBioremediationDegradation pathwayPolycyclic aromatic hydrocarbonsPseudomonas aeruginosa PR23

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.