Evidence map›Paper›PMID 38972072›Full record

ArticleAging2024

Identification of differentially expressed genes to predict the risk of heart failure in older patients with hypertrophic cardiomyopathy.

Hao Dong, Chufan Yin, Dongping Xiao, Yong Tang

Abstract read
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Article in Aging, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Hao DongDepartment of Cardiology, The Second Hospital of Nanjing, Nanjing University of Chinese Medicine, Nanjing 210000, China.
Chufan YinEducation Section, The Second Hospital of Nanjing, Nanjing University of Chinese Medicine, Nanjing 210000, China.
Dongping XiaoDepartment of Cardiology, The First Hospital of Nanchang, Nanchang 330000, China.
Yong TangDepartment of Cardiology, The Second Hospital of Nanjing, Nanjing University of Chinese Medicine, Nanjing 210000, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimHypertrophic cardiomyopathy (HCM) is a common heart disease. Old people with HCM are at high risk of heart failure (HF). This study aimed to identify differentially expressed genes (DEGs) to evaluate the risk of HF in older patients with HCM.

methodsGSE89714 and GSE116250 were downloaded from Gene Expression Omnibus (GEO) database, and DEGs were identified by using limma R package with

resultsWe identified 124 overlap DEGs from the 2 datasets. PPI network showed that COL1A1, COL3A1, COL1A2, BGN, COL5A1, LUM, TGFB2, FMOD, ASPN, and COL14A1 were the top ten genes related to HCM and HF compared with control. Functional and pathway analyses showed that the overlap genes were mainly related to ECM-receptor interaction, ECM organization, Focal adhesion, PI3K-Akt signaling, TGF-beta signaling, and Platelet activation signaling and aggregation. Among the overlap genes, COL5A1 and LUM were significantly upregulated, while TGFB2, FMOD, ASPN, and COL14A1 were significantly downregulated in HF dataset compared with HCM dataset.

conclusionsBioinformatics-based analysis revealed potential genes associated with HCM and HF, which could be utilized to evaluate the risk of HF in older patients with HCM.

Indexed as

Cardiomyopathy, HypertrophicGene Expression ProfilingHeart FailureProtein Interaction MapsAgedDatabases, GeneticFemaleGene Regulatory NetworksHumansMalebioinformaticsdifferential expressed geneheart failurehypertrophic cardiomyopathymicroarray

Identifiers

PMID38972072
PMCPMC11272120

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.