Evidence map›Paper›PMID 38970694›Full record

ArticlePlanta2024

Genome-wide analysis of R2R3-MYB transcription factors in poplar and functional validation of PagMYB147 in defense against Melampsora magnusiana.

Bin Wang, Chaowei Xiong, Zijia Peng, Zeyu Luo, Xiujuan Wang, Shaobing Peng, Zhongdong Yu

Abstract read
In one paragraph

Article in Planta, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Bin WangCollege of Forestry, Northwest A & F University, Yangling, 712100, Shaanxi, China.
Chaowei XiongCollege of Forestry, Northwest A & F University, Yangling, 712100, Shaanxi, China.
Zijia PengCollege of Forestry, Northwest A & F University, Yangling, 712100, Shaanxi, China.
Zeyu LuoCollege of Forestry, Northwest A & F University, Yangling, 712100, Shaanxi, China.
Xiujuan WangCollege of Plant Protection, Gansu Agricultural University, Lanzhou, 730070, Gansu, China.
Shaobing PengCollege of Forestry, Northwest A & F University, Yangling, 712100, Shaanxi, China.
Zhongdong YuCollege of Forestry, Northwest A & F University, Yangling, 712100, Shaanxi, China. yu-10083@163.com.

Funding

National Natural Science Foundation of China Grant No. 31670650
6 · The paper itself

Abstract

MAIN

conclusionTranscription of PagMYB147 was induced in poplar infected by Melampsora magnusiana, and a decline in its expression levels increases the host's susceptibility, whereas its overexpression promotes resistance to rust disease. Poplars are valuable tree species with diverse industrial and silvicultural applications. The R2R3-MYB subfamily of transcription factors plays a crucial role in response to biotic stresses. However, the functional studies on poplar R2R3-MYB genes in resistance to leaf rust disease are still insufficient. We identified 191 putative R2R3-MYB genes in the Populus trichocarpa genome. A phylogenetic analysis grouped poplar R2R3-MYBs and Arabidopsis R2R3-MYBs into 33 subgroups. We detected 12 tandem duplication events and 148 segmental duplication events, with the latter likely being the main contributor to the expansion of poplar R2R3-MYB genes. The promoter regions of these genes contained numerous cis-acting regulatory elements associated with response to stress and phytohormones. Analyses of RNA-Seq data identified a multiple R2R3-MYB genes response to Melampsora magnusiana (Mmag). Among them, PagMYB147 was significantly up-regulated under Mmag inoculation, salicylic acid (SA) and methyl jasmonate (MeJA) treatment, and its encoded product was primarily localized to the cell nucleus. Silencing of PagMYB147 exacerbated the severity of Mmag infection, likely because of decreased reactive oxygen species (ROS) production and phenylalanine ammonia-lyase (PAL) enzyme activity, and up-regulation of genes related to ROS scavenging and down-regulation of genes related to PAL, SA and JA signaling pathway. In contrast, plants overexpressing PagMYB147 showed the opposite ROS accumulation, PAL enzyme activity, SA and JA-related gene expressions, and improved Mmag resistance. Our findings suggest that PagMYB147 acts as a positive regulatory factor, affecting resistance in poplar to Mmag by its involvement in the regulation of ROS homeostasis, SA and JA signaling pathway.

Indexed as

BasidiomycotaCyclopentanesDisease ResistanceGene Expression Regulation, PlantPhylogenyPlant DiseasesPlant ProteinsPopulusTranscription FactorsAcetatesArabidopsisGenome-Wide Association StudyOxylipinsPlant Growth RegulatorsReactive Oxygen SpeciesAcetatesCyclopentanesmethyl jasmonateOxylipinsPlant Growth RegulatorsPlant ProteinsReactive Oxygen SpeciesTranscription FactorsBiotic stressDisease resistanceLeaf rust diseaseP. alba × P. glandulosaPhytohormonesPlant–pathogen interactionR2R3-MYBsROS homeostasis

Identifiers

PMID38970694
PMCPMC11227472

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.