Evidence map›Paper›PMID 38970690›Full record

ArticleClinical and experimental medicine2024

Deciphering glutamine metabolism patterns for malignancy and tumor microenvironment in clear cell renal cell carcinoma.

Gengrun Wu, Teng Li, Yuanbiao Chen, Shiqi Ye, Siqi Zhou, Xi Tian, Aihetaimujiang Anwaier, Shuxuan Zhu, Wenhao Xu, Xiaohang Hao and 2 more

Abstract read
In one paragraph

Article in Clinical and experimental medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Gengrun Wu *Department of Urology, Fudan University Shanghai Cancer Center, Shanghai, 200032, People's Republic of China.
Teng Li *Department of Urology, The Affiliated Taian City Central Hospital of Qingdao University, Taian, 271000, People's Republic of China.
Yuanbiao Chen *Affiliated Hospital of Youjiang Medical University for Nationalities, Baise, 533000, People's Republic of China.
Shiqi Ye *Department of Urology, Fudan University Shanghai Cancer Center, Shanghai, 200032, People's Republic of China.
Siqi ZhouDepartment of Urology, Fudan University Shanghai Cancer Center, Shanghai, 200032, People's Republic of China.
Xi TianDepartment of Urology, Fudan University Shanghai Cancer Center, Shanghai, 200032, People's Republic of China.
Aihetaimujiang AnwaierDepartment of Urology, Fudan University Shanghai Cancer Center, Shanghai, 200032, People's Republic of China.
Shuxuan ZhuDepartment of Urology, Fudan University Shanghai Cancer Center, Shanghai, 200032, People's Republic of China.
Wenhao XuDepartment of Urology, Fudan University Shanghai Cancer Center, Shanghai, 200032, People's Republic of China. xwhao0407@163.com.
Xiaohang HaoDepartment of Urology, The Affiliated Taian City Central Hospital of Qingdao University, Taian, 271000, People's Republic of China. larrybird007@163.com.
Dingwei YeDepartment of Urology, Fudan University Shanghai Cancer Center, Shanghai, 200032, People's Republic of China. dwyelie@163.com.
Hailiang ZhangDepartment of Urology, Fudan University Shanghai Cancer Center, Shanghai, 200032, People's Republic of China. zhanghl918@163.com.

Funding

Beijing Xisike Clinical Oncology Research Foundation No. Y-HR2020MS-0948China Anti-Cancer Association- Hengrui PARP Nicotinamide Cancer Research Fund CETSDHRCORP252-4-021"Fuqing Scholar" Student Scientific Research Program of Shanghai Medical College, Fudan University No. FQXZ202304AShanghai Anticancer Association EYAS PROJECT SACA-CY23A02 and SACA-CY23C04Shanghai Municipal Health Bureau Project No. 2020CXJQ03
6 · The paper itself

Abstract

Clear cell renal cell carcinoma (ccRCC) is the most common subtype of kidney cancer characterized by metabolic reprogramming. Glutamine metabolism is pivotal in metabolic reprogramming, contributing to the significant heterogeneity observed in ccRCC. Consequently, developing prognostic markers associated with glutamine metabolism could enhance personalized treatment strategies for ccRCC patients. This study obtained RNA sequencing and clinical data from 763 ccRCC cases sourced from multiple databases. Consensus clustering of 74 glutamine metabolism related genes (GMRGs)- profiles stratified the patients into three clusters, each of which exhibited distinct prognosis, tumor microenvironment, and biological characteristics. Then, six genes (SMTNL2, MIOX, TMEM27, SLC16A12, HRH2, and SAA1) were identified by machine-learning algorithms to develop a predictive signature related to glutamine metabolism, termed as GMRScore. The GMRScore showed significant differences in clinical prognosis, expression profile of immune checkpoints, abundance of immune cells, and immunotherapy response of ccRCC patients. Besides, the nomogram incorporating the GMRScore and clinical features showed strong predictive performance in prognosis of ccRCC patients. ALDH18A1, one of the GRMGs, exhibited elevated expression level in ccRCC and was related to markedly poorer prognosis in the integrated cohort, validated by proteomic profiling of 232 ccRCC samples from Fudan University Shanghai Cancer Center (FUSCC). Conducting western blotting, CCK-8, transwell, and flow cytometry assays, we found the knockdown of ALDH18A1 in ccRCC significantly promoted apoptosis and inhibited proliferation, invasion, and epithelial-mesenchymal transition (EMT) in two human ccRCC cell lines (786-O and 769-P). In conclusion, we developed a glutamine metabolism-related prognostic signature in ccRCC, which is tightly linked to the tumor immune microenvironment and immunotherapy response, potentially facilitating precision therapy for ccRCC patients. Additionally, this study revealed the key role of ALDH18A1 in promoting ccRCC progression for the first time.

Indexed as

Carcinoma, Renal CellGlutamineKidney NeoplasmsTumor MicroenvironmentApoptosisBiomarkers, TumorCell Line, TumorCell ProliferationFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleMiddle AgedNomogramsPrognosisBiomarkers, TumorGlutamineALDH18A1Clear cell renal cell carcinomaGlutamine metabolismImmunotherapy responsePrognosisTumor microenvironment

Identifiers

PMID38970690
PMCPMC11227463

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.