Evidence map›Paper›PMID 38970670›Full record

ArticleJournal of molecular modeling2024

Energetics of the OH radical H-abstraction reactions from simple aldehydes and their geminal diol forms.

Zoi Salta, Thomas Schaefer, Nicola Tasinato, Martina Kieninger, Aline Katz, Hartmut Herrmann, Oscar N Ventura

Abstract read
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Article in Journal of molecular modeling, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zoi SaltaScuola Normale Superiore, Piazza Dei Cavalieri 7, 56126, Pisa, Italy.ORCID http://orcid.org/0000-0002-7826-0182
Thomas SchaeferAtmospheric Chemistry Department (ACD), Leibniz Institute for Tropospheric Research (TROPOS), Permoserstr. 15, 04318, Leipzig, Germany.ORCID http://orcid.org/0000-0001-7995-4285
Nicola TasinatoScuola Normale Superiore, Piazza Dei Cavalieri 7, 56126, Pisa, Italy.ORCID http://orcid.org/0000-0003-1755-7238
Martina KieningerComputational Chemistry and Biology Group, Facultad de Química, CCBG, Universidad de La República, 11400, Montevideo, DETEMA, Uruguay.ORCID http://orcid.org/0000-0002-5255-7148
Aline KatzComputational Chemistry and Biology Group, Facultad de Química, CCBG, Universidad de La República, 11400, Montevideo, DETEMA, Uruguay.ORCID http://orcid.org/0000-0001-5134-8400
Hartmut HerrmannAtmospheric Chemistry Department (ACD), Leibniz Institute for Tropospheric Research (TROPOS), Permoserstr. 15, 04318, Leipzig, Germany.ORCID http://orcid.org/0000-0001-7044-2101
Oscar N VenturaComputational Chemistry and Biology Group, Facultad de Química, CCBG, Universidad de La República, 11400, Montevideo, DETEMA, Uruguay. Oscar.N.Ventura@gmail.com.ORCID http://orcid.org/0000-0001-5474-0061

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

contextCarbonyl compounds, especially aldehydes, emitted to the atmosphere, may suffer hydration in aerosols or water droplets in clouds. At the same time, they can react with hydroxyl radicals which may add or abstract hydrogen atoms from these species. The interplay between hydration and hydrogen abstraction is studied using density functional and quantum composite theoretical methods, both in the gas phase and in simulated bulk water. The H-abstraction from the aldehydic and geminal diol forms of formaldehyde, acetaldehyde, glycolaldehyde, glyoxal, methylglyoxal, and acrolein is studied to determine whether the substituent has any noticeable effect in the preference for the abstraction of one form or another. It is found that abstraction of the H-atom adjacent to the carbonyl group gives a more stable radical than same abstraction from the geminal diol in the case of formaldehyde, acetaldehyde, and glycolaldehyde. The presence of a delocalizing group in the C

methodsDFT (M06-2X, B2PLYP, PW6B95), CCSD(T), and composite (CBS-QB3, jun-ChS, SCVECV-f12) methods using Dunning basis sets and extrapolation to the CBS limit were used to study the energetics of closed shell aldehydes in their keto and geminal-diol forms, as well as the radical derived from them by hydrogen abstraction. Both gas phase and simulated bulk solvent calculations were performed, in the last case using the Polarizable Continuum Model.

Indexed as

Atmospheric chemistryGlyoxalHydrationHydrogen abstractionMethylglyoxal

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.