Evidence map›Paper›PMID 38969759›Full record

ArticleScientific reports2024

First detection of PCV4 in swine in the United States: codetection with PCV2 and PCV3 and direct detection within tissues.

Molly Kroeger, Diana S Vargas-Bermudez, Jairo Jaime, Julian Parada, Jennifer Groeltz, Philip Gauger, Pablo Piñeyro

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Molly KroegerVeterinary Diagnostic Laboratory, Department of Veterinary Diagnostic and Production Animal Medicine, Iowa State University, 1655 Veterinary Medicine, Ames, IA, 50011, USA.
Diana S Vargas-BermudezAnimal Health Department. Center of Infectious Diseases and Veterinary Immunology, College of Veterinary Medicine and Production Animal, Colombia National University, Bogotá, Colombia.
Jairo JaimeAnimal Health Department. Center of Infectious Diseases and Veterinary Immunology, College of Veterinary Medicine and Production Animal, Colombia National University, Bogotá, Colombia.
Julian ParadaCONICET- Animal Pathology Department. Agronomy and Veterinary College, Río Cuarto National University, Córdoba, Argentina.
Jennifer GroeltzVeterinary Diagnostic Laboratory, Department of Veterinary Diagnostic and Production Animal Medicine, Iowa State University, 1655 Veterinary Medicine, Ames, IA, 50011, USA.
Philip GaugerVeterinary Diagnostic Laboratory, Department of Veterinary Diagnostic and Production Animal Medicine, Iowa State University, 1655 Veterinary Medicine, Ames, IA, 50011, USA.
Pablo PiñeyroVeterinary Diagnostic Laboratory, Department of Veterinary Diagnostic and Production Animal Medicine, Iowa State University, 1655 Veterinary Medicine, Ames, IA, 50011, USA. pablop@iastate.edu.

Funding

Swine Health Information Center (SHIC) 24-015
6 · The paper itself

Abstract

Since PCV4 was first described in 2019, the virus has been identified in several countries in Southeast Asia and Europe. Most studies have been limited to detecting PCV4 by PCR. Thus, PCV4 has an unclear association with clinical disease. This study utilized 512 porcine clinical lung, feces, spleen, serum, lymphoid tissue, and fetus samples submitted to the ISU-VDL from June-September 2023. PCV4 was detected in 8.6% of samples with an average Ct value of 33. While detection rates among sample types were variable, lymphoid tissue had the highest detection rate (18.7%). Two ORF2 sequences were obtained from lymphoid tissue samples and had 96.36-98.98% nucleotide identity with reference sequences. Direct detection of PCV4 by RNAscope revealed viral replication in B lymphocytes and macrophages in lymph node germinal centers and histiocytic and T lymphocyte infiltration in the lamina propria of the small intestine. PCV4 detection was most commonly observed in nursery to finishing aged pigs displaying respiratory and enteric disease. Coinfection with PCV2, PCV3, and other endemic pathogens was frequently observed, highlighting the complex interplay between different PCVs and their potential roles in disease pathogenesis. This study provides insights into the frequency of detection, tissue distribution, and genetic characteristics of PCV4 in the US.

Indexed as

Circoviridae InfectionsCircovirusSwine DiseasesAnimalsCoinfectionLungLymphoid TissueSwineUnited StatesCoinfectionIn situ hybridizationLymphoid tissuePCV2PCV3PCV4

Identifiers

PMID38969759
PMCPMC11226432

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.