Evidence map›Paper›PMID 38968258›Full record

ArticlePloS one2024

A cell competition system with one gene expression from a single-copy gene in one cell.

Yoshinori Hasegawa, Megumi Nakano, Tsutomu Hosouchi, Takashi Watanabe, Izumi Yamaguchi, Manabu Nakayama, Osamu Ohara

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yoshinori HasegawaDepartment of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba, Japan.ORCID 0000-0003-2904-6611
Megumi NakanoKazusa Genome Technologies Inc., Kisarazu, Chiba, Japan.
Tsutomu HosouchiDepartment of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba, Japan.
Takashi WatanabeDepartment of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba, Japan.
Izumi YamaguchiDepartment of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba, Japan.
Manabu NakayamaDepartment of Frontier Research and Development, Kazusa DNA Research Institute, Kisarazu, Chiba, Japan.
Osamu OharaDepartment of Applied Genomics, Kazusa DNA Research Institute, Kisarazu, Chiba, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Even with advanced plasmid and viral vectors, attaining copy numbers of multiple genes among different transfected cells is challenging. We achieved one gene expression from a single-copy gene in one cell using a transgene competition system, a combination of the Kazusa cDNA clones and our dual recombinase-mediated cassette exchange system. All 48 nuclear receptors were simultaneously expressed in one dish at the same expression level in HEK293 using this system, and the cell proliferation rate was compared. Significant differences were observed between cells transfected with CMV- or EF1 promoter-driven expression of the 48 nuclear receptors after 8 weeks. The EF1-NR1I2 cell line, which exhibited the highest increase from 2 to 8 weeks, showed 1.13-fold higher proliferation than the EF1-DsRed line. On the other hand, the EF1-NR4A1 cell line, which showed the maximum decrease at 8 weeks, showed 0.88-fold lower proliferation than the EF1-DsRed line. The results were confirmed in both our transgene competition system and long-term growth experiments. Our transgene competition system offers a wide-range, simple, and accurate cell competition method.

Indexed as

Cell ProliferationTransgenesGene DosageGene ExpressionGenetic VectorsHEK293 CellsHumansPromoter Regions, GeneticReceptors, Cytoplasmic and NuclearTransfectionReceptors, Cytoplasmic and Nuclear

Identifiers

PMID38968258
PMCPMC11226009

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.