Evidence map›Paper›PMID 38966994›Full record

ArticleNucleic acids research2024

Characterization of a MHYT domain-coupled transcriptional regulator that responds to carbon monoxide.

Gonzalo Durante-Rodríguez, Sofía de Francisco-Polanco, José Luis García, Eduardo Díaz

Abstract read
In one paragraph

Article in Nucleic acids research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Gonzalo Durante-RodríguezDepartment of Microbial and Plant Biotechnology, Centro de Investigaciones Biológicas Margarita Salas-CSIC, Calle Ramiro de Maeztu, 9, 28040 Madrid. Spain.
Sofía de Francisco-PolancoDepartment of Microbial and Plant Biotechnology, Centro de Investigaciones Biológicas Margarita Salas-CSIC, Calle Ramiro de Maeztu, 9, 28040 Madrid. Spain.
José Luis GarcíaDepartment of Microbial and Plant Biotechnology, Centro de Investigaciones Biológicas Margarita Salas-CSIC, Calle Ramiro de Maeztu, 9, 28040 Madrid. Spain.
Eduardo DíazDepartment of Microbial and Plant Biotechnology, Centro de Investigaciones Biológicas Margarita Salas-CSIC, Calle Ramiro de Maeztu, 9, 28040 Madrid. Spain.ORCID 0000-0002-9731-6524

Funding

European Union TED2021-132135B-I00Ministry of Science, Innovation and Universities PID2019-110612RB-I00
6 · The paper itself

Abstract

The MHYT domain, identified over two decades ago for its potential to detect diatomic gases like CO, O2 or NO, has awaited experimental validation as a protein sensory domain. Here, we characterize the MHYT domain-containing transcriptional regulator CoxC, which governs the expression of the cox genes responsible for aerobic CO oxidation in the carboxidotrophic bacterium Afipia carboxidovorans OM5. The C-terminal LytTR-type DNA-binding domain of CoxC binds to an operator region consisting of three direct repeats sequences overlapping the -35 box at the target PcoxB promoter, which is consistent with the role of CoxC as a specific transcriptional repressor of the cox genes. Notably, the N-terminal transmembrane MHYT domain endows CoxC with the ability to sense CO as an effector molecule, as demonstrated by the relief of CoxC-mediated repression and binding to the PcoxB promoter upon CO exposure. Furthermore, copper serves as the essential divalent cation for the interaction of CO with CoxC, thereby confirming previous hypothesis regarding the role of copper in the gas-sensing mechanism of MHYT domains. CoxC represents the prototype of a novel subfamily of single-component LytTR transcriptional regulators, characterized by the fusion of a DNA-binding domain with a membrane-bound MHYT sensor domain.

Indexed as

Bacterial ProteinsCarbon MonoxideGene Expression Regulation, BacterialPromoter Regions, GeneticBinding SitesCopperOperator Regions, GeneticProtein BindingProtein DomainsTranscription FactorsTranscription, GeneticBacterial ProteinsCarbon MonoxideCopperTranscription Factors

Identifiers

PMID38966994
PMCPMC11347149

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.