Evidence map›Paper›PMID 38966672›Full record

ArticleRSC chemical biology2024

Chemical tools for profiling the intracellular ADP-ribosylated proteome.

Simeon D Draganov, Michael J Gruet, Daniel Conole, Cristina Balcells, Alexandros P Siskos, Hector C Keun, Dorian O Haskard, Edward W Tate

Abstract read
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Article in RSC chemical biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Simeon D DraganovDepartment of Chemistry, Molecular Sciences Research Hub, Imperial College London London W12 0BZ UK e.tate@imperial.ac.uk.ORCID https://orcid.org/0000-0002-8695-3499
Michael J GruetDepartment of Chemistry, Molecular Sciences Research Hub, Imperial College London London W12 0BZ UK e.tate@imperial.ac.uk.
Daniel ConoleDepartment of Chemistry, Molecular Sciences Research Hub, Imperial College London London W12 0BZ UK e.tate@imperial.ac.uk.ORCID https://orcid.org/0000-0002-3389-8377
Cristina BalcellsDepartment of Surgery and Cancer, Institute of Reproductive and Developmental Biology, Imperial College London London W12 0HS UK.
Alexandros P SiskosDepartment of Surgery and Cancer, Institute of Reproductive and Developmental Biology, Imperial College London London W12 0HS UK.ORCID https://orcid.org/0000-0002-5635-7426
Hector C KeunDepartment of Surgery and Cancer, Institute of Reproductive and Developmental Biology, Imperial College London London W12 0HS UK.
Dorian O HaskardFaculty of Medicine, National Heart and Lung Institute, Imperial Centre for Translational and Experimental Medicine, Imperial College London London W12 0HS UK.
Edward W TateDepartment of Chemistry, Molecular Sciences Research Hub, Imperial College London London W12 0BZ UK e.tate@imperial.ac.uk.ORCID https://orcid.org/0000-0003-2213-5814

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The post-translational modification (PTM) ADP-ribosylation plays an important role in cell signalling and regulating protein function and has been implicated in the development of multiple diseases, including breast and ovarian cancers. Studying the underlying mechanisms through which this PTM contributes towards disease development, however, has been hampered by the lack of appropriate tools for reliable identification of physiologically relevant ADP-ribosylated proteins in a live-cell environment. Herein, we explore the application of an alkyne-tagged proprobe, 6Yn-ProTide-Ad (6Yn-Pro) as a chemical tool for the identification of intracellular ADP-ribosylated proteins through metabolic labelling. We applied targeted metabolomics and chemical proteomics in HEK293T cells treated with 6Yn-Pro to demonstrate intracellular metabolic conversion of the probe into ADP-ribosylation cofactor 6Yn-NAD

Identifiers

PMID38966672
PMCPMC11221532

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.