Evidence map›Paper›PMID 38965649›Full record

ArticleGenome biology and evolution2024

Unanticipated Loss of Inflammasomes in Birds.

Zachary P Billman, Dustin C Hancks, Edward A Miao

Abstract read
In one paragraph

Article in Genome biology and evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. An overview of human inflammasomes: Activation and regulation.Journal of immunology (Baltimore, Md. : 1950) · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Zachary P BillmanDepartment of Microbiology and Immunology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599-7290, USA.ORCID 0000-0001-7738-5795
Dustin C HancksDepartment of Immunology, University of Texas Southwestern Medical Center, Dallas, TX 75390-9093, USA.ORCID 0000-0003-2720-2545
Edward A MiaoDepartment of Integrative Immunobiology, Duke University, Durham, NC 27710, USA.

Funding

UNC Medical Scientist Training ProgramT32GM152316 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Toni Darville, Mohanish P Deshmukh · 2024 to 2026
$4.3M
Innate immune defenses against a cytosolic capsuleR01AI136920 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Edward A Miao · 2019 to 2026
$3.7M
Viral inhibition of cell death in host immune responsesR01AI148302 · NIAID · DUKE UNIVERSITY · PI MIAO, EDWARD A · 2020 to 2024
$3.0M
Pyroptosis maintains the integrity of a granulomaR01AI175078 · NIAID · DUKE UNIVERSITY · PI Edward A Miao · 2023 to 2026
$2.6M
Intestinal epithelial cell exfoliation by caspasesR01AI139304 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MIAO, EDWARD A · 2018 to 2022
$2.2M
Natural killer cell cytotoxicity against intracellular bacteriaR01AI133236 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MIAO, EDWARD A · 2018 to 2022
$2.2M
Evolution-guided Studies of Mitochondrial FunctionsR35GM142689 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI HANCKS, DUSTIN · 2021 to 2025
$2.0M
Inflammasome-gasdermin axis in bullous pemphigoidR01AR072694 · NIAMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LIU, ZHI, MIAO, EDWARD A · 2018 to 2022
$1.9M
Membrane repair boosted by caspase signalingR01AI181815 · NIAID · DUKE UNIVERSITY · PI Edward A Miao · 2024 to 2026
$1.9M
NIAID NIH HHS R01 AI133236NIAID NIH HHS R01 AI136920NIAID NIH HHS R01 AI139304NIAID NIH HHS R01 AI148302NIAID NIH HHS R01 AI175078NIAID NIH HHS R01 AI181815NIAMS NIH HHS R01 AR072694NIGMS NIH HHS R35 GM142689NIGMS NIH HHS T32 GM152316
6 · The paper itself

Abstract

Inflammasomes are multiprotein complexes that form in response to ligands originating from pathogens as well as alterations of normal cell physiology caused by infection or tissue damage. These structures engage a robust inflammatory immune response that eradicates environmental microbes before they cause disease, and slow the growth of bona fide pathogens. Despite their undeniable utility in immunity, inflammasomes are radically reduced in birds. Perhaps most surprising is that, within all birds, NLRP3 is retained, while its signaling adapter ASC is lost, suggesting that NLRP3 signals via a novel unknown adapter. Crocodilian reptiles and turtles, which share a more recent common ancestor with birds, retain many of the lost inflammasome components, indicating that the deletion of inflammasomes occurred after birds diverged from crocodiles. Some bird lineages have even more extensive inflammasome loss, with songbirds continuing to pare down their inflammasomes until only NLRP3 and CARD8 remain. Remarkably, songbirds have lost caspase-1 but retain the downstream targets of caspase-1: IL-1β, IL-18, and the YVAD-linker encoding gasdermin A. This suggests that inflammasomes can signal through alternative proteases to activate cytokine maturation and pyroptosis in songbirds. These observations may reveal new contexts of activation that may be relevant to mammalian inflammasomes and may suggest new avenues of research to uncover the enigmatic nature of the poorly understood NLRP3 inflammasome.

Indexed as

BirdsInflammasomesAnimalsEvolution, MolecularNLR Family, Pyrin Domain-Containing 3 ProteinInflammasomesNLR Family, Pyrin Domain-Containing 3 ProteinavescaspaseinflammasomesNLRP3passeriformespyroptosis

Identifiers

PMID38965649
PMCPMC11258412

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.