Evidence map›Paper›PMID 38962753›Full record

ArticleNeuro-oncology advances

Clinical utility of DNA methylation profiling for choroid plexus tumors.

Kee Kiat Yeo, Cassie B Macrae, Bradley Gampel, Jared T Ahrendsen, Hart Lidov, Karen D Wright, Susan Chi, Katie Fehnel, Lissa Baird, Jessica Clymer and 2 more

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Article in Neuro-oncology advances. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Kee Kiat YeoDepartment of Pediatric Oncology, Dana-Farber/Boston Children's Cancer and Blood Disorder Center, Boston, Massachusetts, USA.ORCID https://orcid.org/0000-0003-0713-6384
Cassie B MacraeDepartment of Pathology, Boston Children's Hospital, Boston, Massachusetts, USA.
Bradley GampelDepartment of Pediatric Oncology, Dana-Farber/Boston Children's Cancer and Blood Disorder Center, Boston, Massachusetts, USA.
Jared T AhrendsenDepartment of Pathology, Northwestern University Feinberg School of Medicine, Chicago, Illinois, USA.
Hart LidovDepartment of Pathology, Boston Children's Hospital, Boston, Massachusetts, USA.
Karen D WrightDepartment of Pediatric Oncology, Dana-Farber/Boston Children's Cancer and Blood Disorder Center, Boston, Massachusetts, USA.
Susan ChiDepartment of Pediatric Oncology, Dana-Farber/Boston Children's Cancer and Blood Disorder Center, Boston, Massachusetts, USA.
Katie FehnelDepartment of Neurosurgery, Boston Children's Hospital, Boston, Massachusetts, USA.
Lissa BairdDepartment of Neurosurgery, Boston Children's Hospital, Boston, Massachusetts, USA.
Jessica ClymerDepartment of Pediatric Oncology, Dana-Farber/Boston Children's Cancer and Blood Disorder Center, Boston, Massachusetts, USA.
Kenneth AldapeCenter for Cancer Research, National Cancer Institute, Bethesda, Maryland, USA.ORCID https://orcid.org/0000-0001-5119-7550
Sanda AlexandrescuDepartment of Pathology, Boston Children's Hospital, Boston, Massachusetts, USA.ORCID https://orcid.org/0000-0001-9246-4184

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Choroid plexus tumors (CPTs) are rare, potentially aggressive CNS tumors with defined histologic criteria for grading. In recent years, several patients within our practice have demonstrated discordance between the histologic diagnosis and clinical behavior. DNA methylation profiling has emerged as a potential diagnostic adjunct for aiding the clinical approach. Methods: We reviewed the clinical and pathologic data of all CPTs diagnosed at Boston Children's Hospital from 1995 to 2023. All cases with available material (38/48) underwent DNA methylation profiling at NIH/NCI, and the classifier results were correlated with the WHO histologic grade and patient outcomes. Survival information was analyzed using Kaplan-Meier curves. Results: There was good correlation (11/12, 92%) between methylation class and WHO histologic grade for choroid plexus carcinomas (CPC); one histologic CPC grouped with choroid plexus papilloma (CPP) group pediatric (P). Five CPPs grouped with methylation class CPC (5/17, 29%). In the group of atypical CPPs ( Conclusions: Results indicated that methylation profiling may serve as a valuable tool in the clinical decision-making process for patients with CPTs, providing additional prognostic information compared to WHO histologic grade alone. The value of methylation array analysis is particularly important given the lack of consensus on treatment regimens for CPTs.

Indexed as

choroid plexus neoplasmsclinical outcomeDNA methylationTP53

Identifiers

PMID38962753
PMCPMC11221062

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