Evidence map›Paper›PMID 38962403›Full record

ArticleBioMed research international2024

An Immunoinformatic-Based In Silico Identification on the Creation of a Multiepitope-Based Vaccination Against the Nipah Virus.

Beant Kaur, Arun Karnwal, Anu Bansal, Tabarak Malik

Abstract read
In one paragraph

Article in BioMed research international, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Beant KaurSchool of Bioengineering and Biosciences Lovely Professional University, Phagwara, Punjab 144411, India.ORCID https://orcid.org/0009-0001-9027-5395
Arun KarnwalSchool of Bioengineering and Biosciences Lovely Professional University, Phagwara, Punjab 144411, India.ORCID https://orcid.org/0000-0001-6514-5647
Anu BansalSchool of Bioengineering and Biosciences Lovely Professional University, Phagwara, Punjab 144411, India.ORCID https://orcid.org/0000-0003-1774-8392
Tabarak MalikDepartment of Biomedical Sciences Institute of Health Jimma University, Jimma, Ethiopia.ORCID https://orcid.org/0000-0002-8332-7927

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The zoonotic viruses pose significant threats to public health. Nipah virus (NiV) is an emerging virus transmitted from bats to humans. The NiV causes severe encephalitis and acute respiratory distress syndrome, leading to high mortality rates, with fatality rates ranging from 40% to 75%. The first emergence of the disease was found in Malaysia in 1998-1999 and later in Bangladesh, Cambodia, Timor-Leste, Indonesia, Singapore, Papua New Guinea, Vietnam, Thailand, India, and other South and Southeast Asian nations. Currently, no specific vaccines or antiviral drugs are available. The potential advantages of epitope-based vaccines include their ability to elicit specific immune responses while minimizing potential side effects. The epitopes have been identified from the conserved region of viral proteins obtained from the UniProt database. The selection of conserved epitopes involves analyzing the genetic sequences of various viral strains. The present study identified two B cell epitopes, seven cytotoxic T lymphocyte (CTL) epitopes, and seven helper T lymphocyte (HTL) epitope interactions from the NiV proteomic inventory. The antigenic and physiological properties of retrieved protein were analyzed using online servers ToxinPred, VaxiJen v2.0, and AllerTOP. The final vaccine candidate has a total combined coverage range of 80.53%. The tertiary structure of the constructed vaccine was optimized, and its stability was confirmed with the help of molecular simulation. Molecular docking was performed to check the binding affinity and binding energy of the constructed vaccine with TLR-3 and TLR-5. Codon optimization was performed in the constructed vaccine within the

Indexed as

Computer SimulationHenipavirus InfectionsNipah VirusAnimalsComputational BiologyEpitopes, B-LymphocyteEpitopes, T-LymphocyteHumansMolecular Docking SimulationVaccinationViral ProteinsViral VaccinesEpitopes, B-LymphocyteEpitopes, T-LymphocyteViral ProteinsViral VaccinesB cell epitopeepidemiologyepitope-based vaccineNipah virusT cell epitope

Identifiers

PMID38962403
PMCPMC11221950

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.