Evidence map›Paper›PMID 38961416›Full record

ArticleBiotechnology for biofuels and bioproducts2024

Efficient synthesis of limonene production in Yarrowia lipolytica by combinatorial engineering strategies.

Young-Kyoung Park, Lara Sellés Vidal, David Bell, Jure Zabret, Mladen Soldat, Martin Kavšček, Rodrigo Ledesma-Amaro

Abstract read
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Article in Biotechnology for biofuels and bioproducts, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Synthetic and systems biotechnology · 2026
    Article
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  3. Review
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  8. Frontiers in bioengineering and biotechnology · 2025
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Young-Kyoung ParkDepartment of Bioengineering and Centre for Synthetic Biology, Imperial College London, London, SW72AZ, UK.
Lara Sellés VidalDepartment of Bioengineering and Centre for Synthetic Biology, Imperial College London, London, SW72AZ, UK.
David BellSynbiCITE Innovation and Knowledge Centre, Imperial College London, London, SW7 2AZ, UK.
Jure ZabretAcies Bio d.o.o., 1000, Tehnološki Park 21Ljubljana, Slovenia.
Mladen SoldatAcies Bio d.o.o., 1000, Tehnološki Park 21Ljubljana, Slovenia.
Martin KavščekAcies Bio d.o.o., 1000, Tehnološki Park 21Ljubljana, Slovenia.
Rodrigo Ledesma-AmaroDepartment of Bioengineering and Centre for Synthetic Biology, Imperial College London, London, SW72AZ, UK. r.ledesma-amaro@imperial.ac.uk.

Funding

Biotechnology and Biological Sciences Research Council 19-ERACoBioTech-33 SyCoLim BB/T011408/1Biotechnology and Biological Sciences Research Council BB/R01602X/1Biotechnology and Biological Sciences Research Council BB/T013176/1British Council 527429894European Commission Biobased Industries Joint (PERFECOAT-101022370)European Commission European Research Council (ERC) (DEUSBIO - 949080)European Commission Yeast4Bio Cost Action 18229
6 · The paper itself

Abstract

backgroundLimonene has a variety of applications in the foods, cosmetics, pharmaceuticals, biomaterials, and biofuels industries. In order to meet the growing demand for sustainable production of limonene at industry scale, it is essential to find an alternative production system to traditional plant extraction. A promising and eco-friendly alternative is the use of microbes as cell factories for the synthesis of limonene.

resultsIn this study, the oleaginous yeast Yarrowia lipolytica has been engineered to produce D- and L-limonene. Four target genes, l- or d-LS (limonene synthase), HMG (HMG-CoA reductase), ERG20 (geranyl diphosphate synthase), and NDPS1 (neryl diphosphate) were expressed individually or fused together to find the optimal combination for higher limonene production. The strain expressing HMGR and the fusion protein ERG20-LS was the best limonene producer and, therefore, selected for further improvement. By increasing the expression of target genes and optimizing initial OD, 29.4 mg/L of L-limonene and 24.8 mg/L of D-limonene were obtained. We also studied whether peroxisomal compartmentalization of the synthesis pathway was beneficial for limonene production. The introduction of D-LS and ERG20 within the peroxisome improved limonene titers over cytosolic expression. Then, the entire MVA pathway was targeted to the peroxisome to improve precursor supply, which increased D-limonene production to 47.8 mg/L. Finally, through the optimization of fermentation conditions, D-limonene production titer reached 69.3 mg/L.

conclusionsIn this work, Y. lipolytica was successfully engineered to produce limonene. Our results showed that higher production of limonene was achieved when the synthesis pathway was targeted to the peroxisome, which indicates that this organelle can favor the bioproduction of terpenes in yeasts. This study opens new avenues for the efficient synthesis of valuable monoterpenes in Y. lipolytica.

Indexed as

BioproductionCompartmentalizationLimoneneMetabolic engineeringMonoterpenePeroxisomePrecision fermentationSynthetic biologyYarrowia lipolytica

Identifiers

PMID38961416
PMCPMC11223395

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.