Evidence map›Paper›PMID 38961199›Full record

ArticleScientific reports2024

Characterization of the GGP gene family in potato (Solanum tuberosum L.) and Pepper (Capsicum annuum L.) and its expression analysis under hormonal and abiotic stresses.

Zhiqi Ding, Kangding Yao, Yandong Yao, Xuejuan Pan, Lizhen Luo, Long Li, Chunlei Wang, Weibiao Liao

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Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Zhiqi DingCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Kangding YaoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Yandong YaoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Xuejuan PanCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Lizhen LuoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Long LiCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Chunlei WangCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
Weibiao LiaoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China. liaowb@gsau.edu.cn.

Funding

National Natural Science Foundation of China Nos. 32360743, 32072559, 31860568, 31560563, and 31160398Natural Science Foundation of Gansu Province, China Nos. 1606RJZA073the Key Research and Development Program of Gansu Province, China No. 21YF5WA096the National Key Research and Development Program 2018YFD1000800the Research Fund of Higher Education of Gansu, China No. 2018C-14 and 2019B-082
6 · The paper itself

Abstract

GDP-L-galactose phosphorylase (GGP) is a key rate-limiting enzyme in plant ascorbic acid synthesis, which plays an important role in plant growth and development as well as stress response. However, the presence of GGP and its function in potato and pepper are not known. In this study, we first identified two GGP genes in each potato and pepper genomes using a genome-wide search approach. We then analyzed their physicochemical properties, conserved domains, protein structures and phylogenetic relationships. Phylogenetic tree analysis revealed that members of the potato and pepper GGP gene families are related to eggplant (Solanum melongena L.), Arabidopsis (Arabidopsis thaliana L.), tobacco (Nicotiana tabacum L.) and tomato (Solanum lycopersicum L.), with tomato being the most closely related. The promoter sequences mainly contain homeopathic elements such as light-responsive, hormone-responsive and stress-responsive, with light-responsive elements being the most abundant. By analyzing the structure of the genes, it was found that there is no transmembrane structure or signal peptide in the GGP gene family of potatoes and peppers, and that all of its members are hydrophilic proteins. The expression profiles of different tissues show that StGGP1 has the highest expression levels in leaves, StGGP2 has the highest expression levels in stamens, and CaGGPs have the highest expression levels in the early stages of fruit development (Dev1). It was found that StGGPs and CaGGPs genes showed different response to phytohormones and abiotic stresses. Abscisic acid (ABA) treatment induced the most significant change in the expression of StGGPs, while the expression of CaGGPs showed the most pronounced change under methyl jasmonate (MeJA) treatment. StGGPs responded mainly to dark treatment, whereas CaGGPs responded mainly to NaCl stress. These results provide an important basis for a detailed study about the functions of GGP homologous genes in potato and pepper in response to abiotic stresses.

Indexed as

CapsicumGene Expression Regulation, PlantMultigene FamilyPhylogenyPlant Growth RegulatorsPlant ProteinsSolanum tuberosumStress, PhysiologicalPromoter Regions, GeneticPlant Growth RegulatorsPlant ProteinsAbiotic stressAscorbic acidCapsicum annuum LGene familyGGPPhytohormoneSolanum tuberosum L

Identifiers

PMID38961199
PMCPMC11222470

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