Evidence map›Paper›PMID 38961197›Full record

ArticleScientific reports2024

Integrative proteome and metabolome unveil the central role of IAA alteration in axillary bud development following topping in tobacco.

Mingmin Zou, Dandan Zhang, Yixuan Liu, Zepeng Chen, Tingyu Xu, Zhuwen Ma, Jiqin Li, Wenji Zhang, Zhenrui Huang, Xiaoying Pan

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mingmin ZouGuangdong Key Laboratory for Crops Genetic Improvement, Guangdong Provincial Engineering and Technology Research Center for Tobacco Breeding and Comprehensive Utilization, Crops Research Institute, Guangdong Academy of Agricultural Sciences (GAAS), Guangzhou, 510640, China.
Dandan ZhangChina National Tobacco Corporation, Guangzhou, 510610, Guangdong Province, China.
Yixuan LiuChina National Tobacco Corporation, Guangzhou, 510610, Guangdong Province, China.
Zepeng ChenChina National Tobacco Corporation, Guangzhou, 510610, Guangdong Province, China.
Tingyu XuGuangdong Key Laboratory for Crops Genetic Improvement, Guangdong Provincial Engineering and Technology Research Center for Tobacco Breeding and Comprehensive Utilization, Crops Research Institute, Guangdong Academy of Agricultural Sciences (GAAS), Guangzhou, 510640, China.
Zhuwen MaGuangdong Key Laboratory for Crops Genetic Improvement, Guangdong Provincial Engineering and Technology Research Center for Tobacco Breeding and Comprehensive Utilization, Crops Research Institute, Guangdong Academy of Agricultural Sciences (GAAS), Guangzhou, 510640, China.
Jiqin LiGuangdong Key Laboratory for Crops Genetic Improvement, Guangdong Provincial Engineering and Technology Research Center for Tobacco Breeding and Comprehensive Utilization, Crops Research Institute, Guangdong Academy of Agricultural Sciences (GAAS), Guangzhou, 510640, China.
Wenji ZhangGuangdong Key Laboratory for Crops Genetic Improvement, Guangdong Provincial Engineering and Technology Research Center for Tobacco Breeding and Comprehensive Utilization, Crops Research Institute, Guangdong Academy of Agricultural Sciences (GAAS), Guangzhou, 510640, China.
Zhenrui HuangGuangdong Key Laboratory for Crops Genetic Improvement, Guangdong Provincial Engineering and Technology Research Center for Tobacco Breeding and Comprehensive Utilization, Crops Research Institute, Guangdong Academy of Agricultural Sciences (GAAS), Guangzhou, 510640, China.
Xiaoying PanGuangdong Key Laboratory for Crops Genetic Improvement, Guangdong Provincial Engineering and Technology Research Center for Tobacco Breeding and Comprehensive Utilization, Crops Research Institute, Guangdong Academy of Agricultural Sciences (GAAS), Guangzhou, 510640, China. panxiaoying0707@126.com.

Funding

the foundation of director of Crops Research Institute, Guangdong Academy of Agricultural Sciences 202203, 202303the NSFC grant 32000214the science and technology project of Shaoguan Tobacco Corporation 20220506The talent training program of Guangdong Academy of Agricultural Sciences R2022PY-QY003
6 · The paper itself

Abstract

Axillary bud is an important aspect of plant morphology, contributing to the final tobacco yield. However, the mechanisms of axillary bud development in tobacco remain largely unknown. To investigate this aspect of tobacco biology, the metabolome and proteome of the axillary buds before and after topping were compared. A total of 569 metabolites were differentially abundant before and 1, 3, and 5 days after topping. KEGG analyses further revealed that the axillary bud was characterized by a striking enrichment of metabolites involved in flavonoid metabolism, suggesting a strong flavonoid biosynthesis activity in the tobacco axillary bud after topping. Additionally, 9035 differentially expressed proteins (DEPs) were identified before and 1, 3, and 5 days after topping. Subsequent GO and KEGG analyses revealed that the DEPs in the axillary bud were enriched in oxidative stress, hormone signal transduction, MAPK signaling pathway, and starch and sucrose metabolism. The integrated proteome and metabolome analysis revealed that the indole-3-acetic acid (IAA) alteration in buds control dormancy release and sustained growth of axillary bud by regulating proteins involved in carbohydrate metabolism, amino acid metabolism, and lipid metabolism. Notably, the proteins related to reactive oxygen species (ROS) scavenging and flavonoid biosynthesis were strongly negatively correlated with IAA content. These findings shed light on a critical role of IAA alteration in regulating axillary bud outgrowth, and implied a potential crosstalk among IAA alteration, ROS homeostasis, and flavonoid biosynthesis in tobacco axillary bud under topping stress, which could improve our understanding of the IAA alteration in axillary bud as an important regulator of axillary bud development.

Indexed as

Indoleacetic AcidsMetabolomeNicotianaPlant ProteinsProteomeFlavonoidsFlowersGene Expression Regulation, PlantPlant Growth RegulatorsFlavonoidsindoleacetic acidIndoleacetic AcidsPlant Growth RegulatorsPlant ProteinsProteomeAxillary budIAAProteome and metabolomeROSTobacco

Identifiers

PMID38961197
PMCPMC11222511

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.