Evidence map›Paper›PMID 38960974›Full record

ArticleAnnals of biomedical engineering2024

OpenHands: An Open-Source Statistical Shape Model of the Finger Bones.

T A Munyebvu, C D Metcalf, C B Burson-Thomas, D Warwick, C Everitt, L King, A Darekar, M Browne, M O W Heller, A S Dickinson

Abstract read
In one paragraph

Article in Annals of biomedical engineering, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

T A MunyebvuUniversity of Southampton, Southampton, UK.
C D MetcalfUniversity of Southampton, Southampton, UK.
C B Burson-ThomasUniversity of Southampton, Southampton, UK.
D WarwickUniversity Hospital Southampton NHS Foundation Trust, Southampton, UK.
C EverittUniversity Hospital Southampton NHS Foundation Trust, Southampton, UK.
L KingUniversity Hospital Southampton NHS Foundation Trust, Southampton, UK.
A DarekarUniversity Hospital Southampton NHS Foundation Trust, Southampton, UK.
M BrowneUniversity of Southampton, Southampton, UK.
M O W HellerUniversity of Southampton, Southampton, UK.
A S DickinsonUniversity of Southampton, Southampton, UK. alex.dickinson@soton.ac.uk.ORCID http://orcid.org/0000-0002-9647-1944

Funding

Engineering and Physical Sciences Research Council EP/R513325/1Horizon 2020 Framework Programme 863183
6 · The paper itself

Abstract

This paper presents statistical shape models of the four fingers of the hand, with an emphasis on anatomic analysis of the proximal and distal interphalangeal joints. A multi-body statistical shape modelling pipeline was implemented on an exemplar training dataset of computed tomography (CT) scans of 10 right hands (5F:5M, 27-37 years, free from disease or injury) imaged at 0.3 mm resolution, segmented, meshed and aligned. Model generated included pose neutralisation to remove joint angle variation during imaging. Repositioning was successful; no joint flexion variation was observed in the resulting model. The first principal component (PC) of morphological variation represented phalanx size in all fingers. Subsequent PCs showed variation in position along the palmar-dorsal axis, and bone breadth: length ratio. Finally, the models were interrogated to provide gross measures of bone lengths and joint spaces. These models have been published for open use to support wider community efforts in hand biomechanical analysis, providing bony anatomy descriptions whilst preserving the security of the underlying imaging data and privacy of the participants. The model describes a small, homogeneous population, and assumptions cannot be made about how it represents individuals outside the training dataset. However, it supplements anthropometric datasets with additional shape information, and may be useful for investigating factors such as joint morphology and design of hand-interfacing devices and products. The model has been shared as an open-source repository ( https://github.com/abel-research/OpenHands ), and we encourage the community to use and contribute to it.

Indexed as

Tomography, X-Ray ComputedAdultFemaleFingersHumansMaleModels, AnatomicModels, BiologicalModels, StatisticalAnatomy modellingAnthropometricsDistal interphalangeal jointErgonomicsMachine LearningPrincipal component analysisProximal interphalangeal joint

Identifiers

PMID38960974
PMCPMC11511744

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.