Evidence map›Paper›PMID 38960642›Full record

ArticleRNA (New York, N.Y.)2024

Structure and sequence at an RNA template 5' end influence insertion of transgenes by an R2 retrotransposon protein.

Sarah M Palm, Connor A Horton, Xiaozhu Zhang, Kathleen Collins

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Review
  3. DNA-bound avian R2 non-LTR retrotransposon protein recruits a second R2 protein for genome-protective second-strand nicking.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sarah M PalmDepartment of Molecular and Cell Biology, University of California at Berkeley, Berkeley, California 94720, USA.
Connor A HortonDepartment of Molecular and Cell Biology, University of California at Berkeley, Berkeley, California 94720, USA.
Xiaozhu ZhangDepartment of Molecular and Cell Biology, University of California at Berkeley, Berkeley, California 94720, USA.
Kathleen CollinsDepartment of Molecular and Cell Biology, University of California at Berkeley, Berkeley, California 94720, USA kcollins@berkeley.edu.ORCID 0000-0003-3172-7088

Funding

THE MOLECULAR BASIS OF CELL FUNCTIONT32GM007232 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI BILDER, DAVID, UNAL, ELCIN · 1985 to 2022
$36.4M
Human genetic supplementation without donor DNA or a DNA breakDP1HL156819 · NHLBI · UNIVERSITY OF CALIFORNIA BERKELEY · PI COLLINS, KATHLEEN · 2020 to 2024
$5.8M
NHLBI NIH HHS DP1 HL156819NIGMS NIH HHS T32 GM007232
6 · The paper itself

Abstract

R2 non-long terminal repeat retrotransposons insert site-specifically into ribosomal RNA genes (rDNA) in a broad range of multicellular eukaryotes. R2-encoded proteins can be leveraged to mediate transgene insertion at 28S rDNA loci in cultured human cells. This strategy,

Indexed as

RetroelementsTransgenesBase SequenceHumansNucleic Acid ConformationRNA, CatalyticTemplates, GeneticRetroelementsRNA, Catalyticgenome engineeringHDV-like ribozymenon-LTR retrotransposonR2 retrotransposontransgene

Identifiers

PMID38960642
PMCPMC11331408

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.