Evidence map›Paper›PMID 38959428›Full record

ArticleCancer discovery2024

Single-Cell View of Tumor Microenvironment Gradients in Pleural Mesothelioma.

Bruno Giotti, Komal Dolasia, William Zhao, Peiwen Cai, Robert Sweeney, Elliot Merritt, Evgeny Kiner, Grace S Kim, Atharva Bhagwat, Thinh Nguyen and 21 more

Abstract read
In one paragraph

Article in Cancer discovery, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Amivantamab Induces Immune-Mediated Cytotoxicity in Mesothelioma Through EGFR and MET Engagement.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Moving Beyond Morphology: Toward a Morpho-Molecular Classification of Pleural Mesothelioma.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Review
  10. Multiomic, Histologic, and scRNA-seq Profiling of Pleural Mesothelioma Reveals Negative Prognosis Associated With a Novel Uncommitted Molecular Phenotype.Journal of thoracic oncology : official publication of the International Association for the Study of Lung Cancer · 2026
    Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Review
  19. Multimodal analysis definesbioRxiv : the preprint server for biology · 2025
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors.

Bruno Giotti *Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0001-8102-5266
Komal Dolasia *Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0009-0007-6983-0052
William Zhao *Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-4661-1419
Peiwen Cai *Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-4774-4392
Robert SweeneyLipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-4781-3685
Elliot MerrittDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-4091-8193
Evgeny KinerImmunai, New York, New York.ORCID 0009-0009-3979-4032
Grace S KimDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-8680-336X
Atharva BhagwatDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0009-0004-7311-0283
Thinh NguyenDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-4875-1930
Samarth HegdeLipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0001-6319-0372
Bailey G FitzgeraldDepartment of Hematology and Medical Oncology, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-5566-5953
Sanjana ShroffDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-2839-0322
Travis DawsonThe Human Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-9609-793X
Monica Garcia-BarrosDepartment of Pathology, Molecular and Cell-Based Medicine, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-3356-4008
Jamshid Abdul-GhafarDepartment of Pathology, Molecular and Cell-Based Medicine, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-6575-8870
Rachel ChenThe Human Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0009-0004-0021-2561
Sacha GnjaticLipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0001-5643-9520
Alan SotoDepartment of Pathology, Molecular and Cell-Based Medicine, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0009-0000-9108-7364
Rachel BrodyDepartment of Pathology, Molecular and Cell-Based Medicine, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0001-9280-517X
Seunghee Kim-SchulzeThe Human Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-0192-4400
Zhihong ChenThe Human Immune Monitoring Center, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0001-7403-7015
Kristin G BeaumontDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-3075-9977
Miriam MeradLipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-4481-7827
Raja M FloresDepartment of Thoracic Surgery, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0001-7718-7422
Robert P SebraDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0001-9267-2426
Amir HorowitzLipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-3100-2810
Thomas U MarronLipschultz Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0001-5903-8191
Anna TochevaDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-3327-0811
Andrea WolfTisch Cancer Institute, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0003-3645-2917
Alexander M TsankovDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York.ORCID 0000-0002-7955-4414

Funding

Investigating Macrophage Molecular and Functional Diversity in Tumor ImmunityR01CA254104 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI BROWN, BRIAN D, MERAD, MIRIAM · 2021 to 2025
$3.4M
Type 2 immunity: a primitive response to epithelial injury that shapes bone marrow and lung myeloid crosstalkR01CA277479 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MIRIAM MERAD, Thomas Urban Marron · 2023 to 2026
$2.6M
Defining the barriers to immune surveillance in solid tumorsK00CA223043 · NCI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI HEGDE, SAMARTH · 2020 to 2023
$374k
American Association for Thoracic Surgery (AATS)Icahn School of Medicine at Mount Sinai (ISMMS)ImmunaiNCI NIH HHS K00 CA223043NCI NIH HHS R01 CA254104NCI NIH HHS R01 CA277479
6 · The paper itself

Abstract

Immunotherapies have shown great promise in pleural mesothelioma (PM), yet most patients still do not achieve significant clinical response, highlighting the importance of improving the understanding of the tumor microenvironment (TME). Here, we utilized high-throughput, single-cell RNA sequencing (scRNA-seq) to de novo identify 54 expression programs and construct a comprehensive cellular catalog of the PM TME. We found four cancer-intrinsic programs associated with poor disease outcome and a novel fetal-like, endothelial cell population that likely responds to VEGF signaling and promotes angiogenesis. Across cellular compartments, we observe substantial difference in the TME associated with a cancer-intrinsic sarcomatoid signature, including enrichment in fetal-like endothelial cells, CXCL9+ macrophages, and cytotoxic, exhausted, and regulatory T cells, which we validated using imaging and bulk deconvolution analyses on independent cohorts. Finally, we show, both computationally and experimentally, that NKG2A:HLA-E interaction between NK and tumor cells represents an important new therapeutic axis in PM, especially for epithelioid cases. Significance: This manuscript presents the first single-cell RNA sequencing atlas of PM tumor microenvironment. Findings of translational relevance, validated experimentally and using independent bulk cohorts, include identification of gene programs predictive of survival, a fetal-like endothelial cell population, and NKG2A blockade as a promising new immunotherapeutic intervention in PM.

Indexed as

MesotheliomaPleural NeoplasmsSingle-Cell AnalysisTumor MicroenvironmentHumansMesothelioma, Malignant

Identifiers

PMID38959428
PMCPMC13109001

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.