Evidence map›Paper›PMID 38959031›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2024

POTRA domains of the TamA insertase interact with the outer membrane and modulate membrane properties.

Abdelkader Mellouk, Paul Jaouen, Louis-Jacques Ruel, Michel Lê, Cyrielle Martini, Trevor F Moraes, Majida El Bakkouri, Patrick Lagüe, Elodie Boisselier, Charles Calmettes

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Abdelkader MelloukInstitut National de la Rechyuerche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Laval, QC H7V 1B7, Canada.
Paul JaouenRegroupement Québécois de recherche sur la fonction, la structure et l'ingénierie des protéines (PROTEO), Université du Québec à Montréal, Montréal, QC H2X 3Y7, Canada.
Louis-Jacques RuelRegroupement Québécois de recherche sur la fonction, la structure et l'ingénierie des protéines (PROTEO), Université du Québec à Montréal, Montréal, QC H2X 3Y7, Canada.ORCID 0000-0001-5629-7315
Michel LêInstitut National de la Rechyuerche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Laval, QC H7V 1B7, Canada.
Cyrielle MartiniInstitut National de la Rechyuerche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Laval, QC H7V 1B7, Canada.
Trevor F MoraesDepartment of Biochemistry, University of Toronto, Toronto, ON M5G 1M1, Canada.ORCID 0000-0001-9883-6145
Majida El BakkouriNational Research Council Canada, Human Health Therapeutics, Montréal, QC H4P 2R2, Canada.
Patrick LagüeRegroupement Québécois de recherche sur la fonction, la structure et l'ingénierie des protéines (PROTEO), Université du Québec à Montréal, Montréal, QC H2X 3Y7, Canada.
Elodie BoisselierRegroupement Québécois de recherche sur la fonction, la structure et l'ingénierie des protéines (PROTEO), Université du Québec à Montréal, Montréal, QC H2X 3Y7, Canada.ORCID 0000-0001-8281-5235
Charles CalmettesInstitut National de la Rechyuerche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Laval, QC H7V 1B7, Canada.ORCID 0000-0002-2542-4382

Funding

Canadian Government | Natural Sciences and Engineering Research Council of Canada (NSERC) RGPIN-2017-06091Canadian Government | Natural Sciences and Engineering Research Council of Canada (NSERC) RGPIN-2022-03958FRQ | Fonds de recherche du Québec - Nature et technologies (FRQNT) 2019-NC-253753
6 · The paper itself

Abstract

The outer membrane (OM) of gram-negative bacteria serves as a vital organelle that is densely populated with OM proteins (OMPs) and plays pivotal roles in cellular functions and virulence. The assembly and insertion of these OMPs into the OM represent a fundamental process requiring specialized molecular chaperones. One example is the translocation and assembly module (TAM), which functions as a transenvelope chaperone promoting the folding of specific autotransporters, adhesins, and secretion systems. The catalytic unit of TAM, TamA, comprises a catalytic β-barrel domain anchored within the OM and three periplasmic polypeptide-transport-associated (POTRA) domains that recruit the TamB subunit. The latter acts as a periplasmic ladder that facilitates the transport of unfolded OMPs across the periplasm. In addition to their role in recruiting the auxiliary protein TamB, our data demonstrate that the POTRA domains mediate interactions with the inner surface of the OM, ultimately modulating the membrane properties. Through the integration of X-ray crystallography, molecular dynamic simulations, and biomolecular interaction methodologies, we located the membrane-binding site on the first and second POTRA domains. Our data highlight a binding preference for phosphatidylglycerol, a minor lipid constituent present in the OM, which has been previously reported to facilitate OMP assembly. In the context of the densely OMP-populated membrane, this association may serve as a mechanism to secure lipid accessibility for nascent OMPs through steric interactions with existing OMPs, in addition to creating favorable conditions for OMP biogenesis.

Indexed as

Bacterial Outer Membrane ProteinsEscherichia coli ProteinsBacterial Outer MembraneEscherichia coliModels, MolecularMolecular ChaperonesPeriplasmProtein DomainsProtein FoldingBacterial Outer Membrane ProteinsEscherichia coli ProteinsMolecular ChaperonesYtfM protein, E colibiophysicslipid interactionsmembrane biogenesisproteinstructural biology

Identifiers

PMID38959031
PMCPMC11252910

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.