Evidence map›Paper›PMID 38957687›Full record

ArticleOpen forum infectious diseases2024

Culture-Free Whole Genome Sequencing of

Shruthi Vasanthaiah, Renu Verma, Ajay Kumar, Aravind K Bandari, John George, Mona Rastogi, Gowrang Kasaba Manjunath, Jyoti Sharma, Abhishek Kumar, Janavi Subramani and 2 more

Abstract read
In one paragraph

Article in Open forum infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Direct nanopore sequencing ofMicrobial genomics · 2026
    Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Shruthi VasanthaiahManipal Academy of Higher Education, Manipal, Karnataka, India.
Renu VermaManipal Academy of Higher Education, Manipal, Karnataka, India.ORCID https://orcid.org/0000-0003-1277-8824
Ajay KumarManipal Academy of Higher Education, Manipal, Karnataka, India.
Aravind K BandariManipal Academy of Higher Education, Manipal, Karnataka, India.
John GeorgeManipal Academy of Higher Education, Manipal, Karnataka, India.
Mona RastogiManipal Academy of Higher Education, Manipal, Karnataka, India.
Gowrang Kasaba ManjunathManipal Academy of Higher Education, Manipal, Karnataka, India.
Jyoti SharmaManipal Academy of Higher Education, Manipal, Karnataka, India.
Abhishek KumarManipal Academy of Higher Education, Manipal, Karnataka, India.
Janavi SubramaniManipal Academy of Higher Education, Manipal, Karnataka, India.
Kiran ChawlaDepartment of Microbiology, Kasturba Medical College Manipal, Manipal Academy of Higher Education, Manipal, Karnataka, India.
Akhilesh PandeyManipal Academy of Higher Education, Manipal, Karnataka, India.ORCID https://orcid.org/0000-0001-9943-6127

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Direct whole genome sequencing (WGS) of Methods: We prospectively collected 34 samples (sputum, n = 17; bronchoalveolar lavage, n = 13; and pus, n = 4) from patients with active tuberculosis (TB). Prior to DNA extraction, we used a ligand-mediated magnetic bead method to enrich Results: Conclusions: We demonstrate the feasibility of magnetic bead-based enrichment for culture-free WGS of

Indexed as

culture-freedrug resistanceMycobacterium tuberculosisTB beadswhole genome sequencing

Identifiers

PMID38957687
PMCPMC11218775

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.