Evidence map›Paper›PMID 38957136›Full record

ArticleJournal of the American Chemical Society2024

Rapid Protein-Ligand Affinity Determination by Photoinduced Hyperpolarized NMR.

Matthias Bütikofer, Gabriela R Stadler, Harindranath Kadavath, Riccardo Cadalbert, Felix Torres, Roland Riek

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Predictions of Steady-State Photo-CIDNP Enhancement by Machine Learning.Journal of the American Chemical Society · 2025
    Article
  3. Review
  4. Article
  5. Halogen-Bond-MediatedThe journal of physical chemistry letters · 2025
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Matthias BütikoferInstitute for Molecular Physical Science, Vladimir Prelog Weg 2, 8093 Zürich, Switzerland.
Gabriela R StadlerInstitute for Molecular Physical Science, Vladimir Prelog Weg 2, 8093 Zürich, Switzerland.ORCID 0000-0002-9852-6427
Harindranath KadavathInstitute for Molecular Physical Science, Vladimir Prelog Weg 2, 8093 Zürich, Switzerland.ORCID 0000-0002-4559-4389
Riccardo CadalbertInstitute for Molecular Physical Science, Vladimir Prelog Weg 2, 8093 Zürich, Switzerland.
Felix TorresInstitute for Molecular Physical Science, Vladimir Prelog Weg 2, 8093 Zürich, Switzerland.ORCID 0000-0003-0055-9069
Roland RiekInstitute for Molecular Physical Science, Vladimir Prelog Weg 2, 8093 Zürich, Switzerland.ORCID 0000-0002-6333-066X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The binding affinity determination of protein-ligand complexes is a cornerstone of drug design. State-of-the-art techniques are limited by lengthy and expensive processes. Building upon our recently introduced novel screening method utilizing photochemically induced dynamic nuclear polarization (photo-CIDNP) NMR, we provide the methodological framework to determine binding affinities within 5-15 min using 0.1 mg of protein. The accuracy of our method is demonstrated for the affinity constants of peptides binding to a PDZ domain and fragment ligands binding to the protein PIN1. The method can also be extended to measure the affinity of nonphoto-CIDNP-polarizable ligands in competition binding experiments. Finally, we demonstrate a strong correlation between the ligand-reduced signals in photo-CIDNP-based NMR fragment screening and the well-established saturation transfer difference (STD) NMR. Thus, our methodology measures protein-ligand affinities in the micro- to millimolar range in only a few minutes and informs on the binding epitope in a single-scan experiment, opening new avenues for early stage drug discovery approaches.

Indexed as

Nuclear Magnetic Resonance, BiomolecularLigandsMagnetic Resonance SpectroscopyModels, MolecularNIMA-Interacting Peptidylprolyl IsomerasePDZ DomainsPeptidesPhotochemical ProcessesProtein BindingProteinsLigandsNIMA-Interacting Peptidylprolyl IsomerasePeptidesProteins

Identifiers

PMID38957136
PMCPMC11228983

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.